Gene Psyr_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0172 
Symbol 
ID3365648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp186394 
End bp186870 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID637650515 
Producthypothetical protein 
Protein accessionYP_233283 
Protein GI66043442 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGACAT TCGATCATCT GACAGTCATC GGCCTGCGCG AGTGGGTGGC GCTCCCCGAC 
CTGGGGGTGG CAGGTCTGCG GGCAAAAATC GATACCGGTG CGAGCACGTC GAGTCTGCAT
GCCACGGAAA TCGAACCTTT TGAGCGCAAT GGCCAGAAAT GGGTGCGCTT CAACGCGCAT
CTGGGCACGG TGGTTCAGTT GCGGCATCGT CGCTGCGAAG CGCAACTGGT TGCCATGAAA
ACCATTAAAA GCTCCAACGG TCAGGCGCAG GTGCGCTATG TCATTCGCAC CACGCTGGCC
CTGGGTGATC GTATCTGGCC GGTGGAATTC ACACTGGCCT GCCGCAAGTC GATGCGTTAT
CGACTGCTGC TGGGTTCCAA GGCTCTGATC GACGGCCAGC TGGTGGTCAA TCCGGGCATA
ACTTACGTAC AAGACAAGCC GGTGTTCCCG GCCTCTACTT CCTCAGGTGT TGCATGA
 
Protein sequence
MKTFDHLTVI GLREWVALPD LGVAGLRAKI DTGASTSSLH ATEIEPFERN GQKWVRFNAH 
LGTVVQLRHR RCEAQLVAMK TIKSSNGQAQ VRYVIRTTLA LGDRIWPVEF TLACRKSMRY
RLLLGSKALI DGQLVVNPGI TYVQDKPVFP ASTSSGVA