Gene Psyr_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0171 
Symbol 
ID3365647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp185595 
End bp186377 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID637650514 
ProductEAL 
Protein accessionYP_233282 
Protein GI66043441 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGACT TTCCAACTTC GTTGACCGCC CCCAAAAAGG GGTGTGAGGG CTGCACCGGC 
AGTCCGGAAC TGGGCTTTTC GTTTGATTAT GCCTATCAAC CCATCGTCAA CCTGCACGAC
CAGTCGATCT TTGCCCATGA AGCGCTGGTC CGGGGCCCGA ATGGCGAGGG CGCAATGTCA
GTCCTGAGTC AGGTCACCGA CCAGAACCGC TATCGCTTCG ATCAGACCTG CCGGACCACG
GCCATCGCCG GCGCTGCGAA ACTGGGCATG ACCGAGCGTT TATCGATCAA CTTTCTGCCA
AATGCCGTGT ATCGTCCCGA GCTGTGTATC CGCAGCACGC TGGAAGCGGC CAAGCGGCAT
GACTTTCCCA TCGAGCGGTT GATTTTCGAG ACCATCGAAA GCGAACATGT GTGCAGCAAA
GGCCATTTGA GCAATATCCT GCGCGAGTAC CGGGAGTTCG GCTTCATGAC CGCTATCGAT
GACTTCGGCG CCGGGTATTC AGGCCTGACA CTGCTGGCCG ATTTTCAACC CGACCTGATC
AAACTCGACA TGAACCTGGT ACGCGATGTT CATCGCAATC GCGCGCGTCA GGCGATTGTT
CGCGCGGTTG TCACAATGTG TTCGGACTTG GGGATTAAAG TCATCGCAGA AGGTATCGAA
CATATTGAAG AGCGGGATTT TCTGGCAGAT TGCGGCATAT CCCTGATGCA AGGCTATCTG
TTCGCCAAAC CCGCATTCAA AGCCCTGGCT CAGGTAGCCC CCGAGGCCTG GCAGAAGTCT
TGA
 
Protein sequence
MTDFPTSLTA PKKGCEGCTG SPELGFSFDY AYQPIVNLHD QSIFAHEALV RGPNGEGAMS 
VLSQVTDQNR YRFDQTCRTT AIAGAAKLGM TERLSINFLP NAVYRPELCI RSTLEAAKRH
DFPIERLIFE TIESEHVCSK GHLSNILREY REFGFMTAID DFGAGYSGLT LLADFQPDLI
KLDMNLVRDV HRNRARQAIV RAVVTMCSDL GIKVIAEGIE HIEERDFLAD CGISLMQGYL
FAKPAFKALA QVAPEAWQKS