Gene Psyr_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0168 
Symbol 
ID3365644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp182216 
End bp183760 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content61% 
IMG OID637650511 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_233279 
Protein GI66043438 
COG category[C] Energy production and conversion 
COG ID[COG1866] Phosphoenolpyruvate carboxykinase (ATP) 
TIGRFAM ID[TIGR00224] phosphoenolpyruvate carboxykinase (ATP) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.90568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA CCAACAACGC TGTGTACACC GATCTGAGCA CCGACGAACT GGTCAAGGAA 
GCCCTTGCCC GCAAAGAAGG CGTACTTTCC GATACTGGCG CACTGGTTGT GGAGACAGGC
CATCGTACTG GCCGTTCGCC GGTCGATCGT TTCATCGTTG AAGAGCCGAG CACTCAGGAC
GCCATCGCCT GGGGCCCGAT CAACCGCAAG TTCCCGGCCG AGAAATTCGA CGCCCTGTGG
AACCGTGTCG GCGCCTACCT CGCCGAGCGC GAGCGCTTCG TTTCCCACGT TCATGTAGGC
TCCGATCCTG CGCACTACCT GCCAGTCAAG ATGACCACCG AGACTGCGTG GCACAATCTG
TTCGGCCGTT GCCTGTTCAT CAACCCTGAA CAGTACAACC CGGCTGGCAA GGACGAGTGG
GAAATCCAGA ACGCGCCATG GTTCGTCTGC GACCCTGAGC GTGACGGCAC CAACTCCGAC
GGCACCGTAA TCATCAACTT CGCGGCCCGC AAGGTGCTGA TCGCCGGCAT GCGTTATGCC
GGCGAAATGA AGAAAGCCAT GTTCTCGGTG CAGAACTTCC TGCTCCCGGC GTCCGACGTT
CTGCCGATGC ACTGCGCGGC CAACATGGGC GAAGAGGGCG ATGTAACCCT GTTCTTCGGT
CTGTCCGGCA CCGGCAAGAC CACCCTGTCC GCCGACGAAA GCCGTTACCT GATCGGTGAC
GACGAACACG GCTGGGGCGA AGGCGTGGTG TTCAACATCG AAGGCGGTTG CTATGCCAAG
TGCATCGACC TGTCCGAGAA GAACGAGCCG GTCATCTGGA AAGCCATCCA GCACGGCGCC
GTACTGGAAA ACGTCGTACT CGACCCGGTC ACCAAAAAAG CCGACTACGC CGACAGCAGC
CTGACCCAGA ACAGCCGTGC GGCCTACCCG CGCGAACTGA TCGAAAAACG CGCACCGAAA
AACCTCGGTG GCGAGCCGAA CGCCGTTATC TTCCTGACCT GCGACCTGAC CGGCGTACTG
CCGCCTGTGT CGATCCTCAG CGAAGAACAG GCTGCCTACC ACTTCCTGTC GGGTTACACC
GCACTGGTCG GCTCGACTGA AATGGGTTCG GGTTCGGGCA TCAAGTCCAC CTTCTCCACC
TGCTTCGGCG CACCGTTCTT CCCGCGTCCG GCTGGCGAAT ACGCAGAGCT GCTGATCAAG
CGCATCCGCG GCTTCAAATC CAAGGTCTAC CTGGTCAACA CCGGCTGGAC CGGCGGTGGC
TACGGCGTCG GCAAGCGCTT CAACATCCCG ACCACCCGTG GCGTGATCGC AGCGATCCAG
AGCGGCGCAC TGATCGGTGC CGAAACCGAA CACCTCGACA CCATCAACCT CGACGTACCG
AAGTCGGTAC CCGGCGTCGA TACCGGCCTG CTCAACCCAC GCAACACCTG GGCTGACAAG
GCTGCCTACG ACGAAGCGGC AAAAGCACTG GCTGGCCTGT TCGTGGAGAA CTTCAAGAAG
TTCGACGTGA GCGACGCCAT CAAGGCTGCG GGTCCGAAGT TGTAA
 
Protein sequence
MTQTNNAVYT DLSTDELVKE ALARKEGVLS DTGALVVETG HRTGRSPVDR FIVEEPSTQD 
AIAWGPINRK FPAEKFDALW NRVGAYLAER ERFVSHVHVG SDPAHYLPVK MTTETAWHNL
FGRCLFINPE QYNPAGKDEW EIQNAPWFVC DPERDGTNSD GTVIINFAAR KVLIAGMRYA
GEMKKAMFSV QNFLLPASDV LPMHCAANMG EEGDVTLFFG LSGTGKTTLS ADESRYLIGD
DEHGWGEGVV FNIEGGCYAK CIDLSEKNEP VIWKAIQHGA VLENVVLDPV TKKADYADSS
LTQNSRAAYP RELIEKRAPK NLGGEPNAVI FLTCDLTGVL PPVSILSEEQ AAYHFLSGYT
ALVGSTEMGS GSGIKSTFST CFGAPFFPRP AGEYAELLIK RIRGFKSKVY LVNTGWTGGG
YGVGKRFNIP TTRGVIAAIQ SGALIGAETE HLDTINLDVP KSVPGVDTGL LNPRNTWADK
AAYDEAAKAL AGLFVENFKK FDVSDAIKAA GPKL