Gene Psyr_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0166 
Symbol 
ID3365642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp180107 
End bp181417 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content42% 
IMG OID637650509 
Producthypothetical protein 
Protein accessionYP_233277 
Protein GI66043436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.539616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATGG CAAAAGTTAG AAAAATACCT TACTACACTA TGGAGCGATC AATATTTCGA 
GGGAAGGTAT GGAAAGAGAA TGATGGTTTA GATGGCGCAG TACCCATCAA TACTCCACAA
AAAATCTCTT ACAATCGTTG TGCGCCTGGT CAAGTGTTCT TAAAGTCTGC TGAGCCTGGT
GAAGAGCAGT TCATGGTGCC GCAAACAGAA GCGGGAGGTC AGAAATCAAC TGCTGGGGTT
AGAAAAAATA AGCCATTCTC CGTGGAATCT AAAACTTCAG TGTCTGATGC TCTAGAGGCT
GATGCAGAAG ATAAAGAAAA GCTTCCAGAG TTTGATCTTC AGGATATTCC TTTGGCCATG
GACAATATTG GTTGGCCGAT AGCTGCCAAG ATTGCCAGAC AGTGGTTCGC AAGCCCTAAG
CATATCTATA ATGATCGACC CAATTCAATT CAGCCCATTG ATGACGCAAC CCTGACGTTA
AAATGGGCGT TGAAGTATGG GAGCGTCGCA GAGAAATTCA ACGAGTTGAT TGAGGAAAAG
ATTTACTCTG AAAAAGCAAT TGCAGGCGCT AGACATAAAA TTCTCAAGCG AGTAAAAAAT
AAATTTGATG AATCTAGGTC GGCAGCAAAT CTTTCCTTTG ATACAGCTCC TTGGATAGGT
GATATCAGGC AGTTTCATAT TGATTGGCAA ATTCAGTTTC AGGCAATATC AACAAGCAAC
ACGCTTGACG GCCTGAGTTT AACTGATCTC ACCGCGACGC TAGGGAGTTT TAATATTTAT
GCGGCCATTG GCGTGGTTGA AGTTGCTGTG GAAAAGTTTT ACAAATATGA CGATCAAGCC
AGAACCAAAA CATTTTGCGT CGACGCAACG GCGGCTATTA CCTGTGTGTA TACCTACCTG
AAAGATAACT ATTCTTTTAA TGACAAAAAT GATGGTAGCA GCCAATATCT GGGCCACTGG
AACAAAAATG ATATGATTCT TTCTTACTCT GCCGTTGTCA GTGATCTGGT TGACGGTAAG
AAAATTCATA CCCGTATGGG AAGTACCCCG ATAACTGAAA CTAAAATCAA TTGGGACTAT
TTGCCTGGAG GCCAGCTTGA CAAGCCAGTG GATAAAAGAA CAGGTTTGGT AAGAAAATTT
ATGGAGAAAG ATGTTTACTG GCCTGTTTAC AACAGCTCTT ATAGTGAGTG GAGAGAAAAG
CATGGCCGGG GTGGCGATTT TATGATCTAC AGCAGACCGA AAATCCACAA ACTGAAAAAG
CCCATCATTA TAAAGCTGGA TACATTATGC AAACCTTCAG AACCCATGTA A
 
Protein sequence
MVMAKVRKIP YYTMERSIFR GKVWKENDGL DGAVPINTPQ KISYNRCAPG QVFLKSAEPG 
EEQFMVPQTE AGGQKSTAGV RKNKPFSVES KTSVSDALEA DAEDKEKLPE FDLQDIPLAM
DNIGWPIAAK IARQWFASPK HIYNDRPNSI QPIDDATLTL KWALKYGSVA EKFNELIEEK
IYSEKAIAGA RHKILKRVKN KFDESRSAAN LSFDTAPWIG DIRQFHIDWQ IQFQAISTSN
TLDGLSLTDL TATLGSFNIY AAIGVVEVAV EKFYKYDDQA RTKTFCVDAT AAITCVYTYL
KDNYSFNDKN DGSSQYLGHW NKNDMILSYS AVVSDLVDGK KIHTRMGSTP ITETKINWDY
LPGGQLDKPV DKRTGLVRKF MEKDVYWPVY NSSYSEWREK HGRGGDFMIY SRPKIHKLKK
PIIIKLDTLC KPSEPM