Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0166 |
Symbol | |
ID | 3365642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 180107 |
End bp | 181417 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637650509 |
Product | hypothetical protein |
Protein accession | YP_233277 |
Protein GI | 66043436 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.539616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTATGG CAAAAGTTAG AAAAATACCT TACTACACTA TGGAGCGATC AATATTTCGA GGGAAGGTAT GGAAAGAGAA TGATGGTTTA GATGGCGCAG TACCCATCAA TACTCCACAA AAAATCTCTT ACAATCGTTG TGCGCCTGGT CAAGTGTTCT TAAAGTCTGC TGAGCCTGGT GAAGAGCAGT TCATGGTGCC GCAAACAGAA GCGGGAGGTC AGAAATCAAC TGCTGGGGTT AGAAAAAATA AGCCATTCTC CGTGGAATCT AAAACTTCAG TGTCTGATGC TCTAGAGGCT GATGCAGAAG ATAAAGAAAA GCTTCCAGAG TTTGATCTTC AGGATATTCC TTTGGCCATG GACAATATTG GTTGGCCGAT AGCTGCCAAG ATTGCCAGAC AGTGGTTCGC AAGCCCTAAG CATATCTATA ATGATCGACC CAATTCAATT CAGCCCATTG ATGACGCAAC CCTGACGTTA AAATGGGCGT TGAAGTATGG GAGCGTCGCA GAGAAATTCA ACGAGTTGAT TGAGGAAAAG ATTTACTCTG AAAAAGCAAT TGCAGGCGCT AGACATAAAA TTCTCAAGCG AGTAAAAAAT AAATTTGATG AATCTAGGTC GGCAGCAAAT CTTTCCTTTG ATACAGCTCC TTGGATAGGT GATATCAGGC AGTTTCATAT TGATTGGCAA ATTCAGTTTC AGGCAATATC AACAAGCAAC ACGCTTGACG GCCTGAGTTT AACTGATCTC ACCGCGACGC TAGGGAGTTT TAATATTTAT GCGGCCATTG GCGTGGTTGA AGTTGCTGTG GAAAAGTTTT ACAAATATGA CGATCAAGCC AGAACCAAAA CATTTTGCGT CGACGCAACG GCGGCTATTA CCTGTGTGTA TACCTACCTG AAAGATAACT ATTCTTTTAA TGACAAAAAT GATGGTAGCA GCCAATATCT GGGCCACTGG AACAAAAATG ATATGATTCT TTCTTACTCT GCCGTTGTCA GTGATCTGGT TGACGGTAAG AAAATTCATA CCCGTATGGG AAGTACCCCG ATAACTGAAA CTAAAATCAA TTGGGACTAT TTGCCTGGAG GCCAGCTTGA CAAGCCAGTG GATAAAAGAA CAGGTTTGGT AAGAAAATTT ATGGAGAAAG ATGTTTACTG GCCTGTTTAC AACAGCTCTT ATAGTGAGTG GAGAGAAAAG CATGGCCGGG GTGGCGATTT TATGATCTAC AGCAGACCGA AAATCCACAA ACTGAAAAAG CCCATCATTA TAAAGCTGGA TACATTATGC AAACCTTCAG AACCCATGTA A
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Protein sequence | MVMAKVRKIP YYTMERSIFR GKVWKENDGL DGAVPINTPQ KISYNRCAPG QVFLKSAEPG EEQFMVPQTE AGGQKSTAGV RKNKPFSVES KTSVSDALEA DAEDKEKLPE FDLQDIPLAM DNIGWPIAAK IARQWFASPK HIYNDRPNSI QPIDDATLTL KWALKYGSVA EKFNELIEEK IYSEKAIAGA RHKILKRVKN KFDESRSAAN LSFDTAPWIG DIRQFHIDWQ IQFQAISTSN TLDGLSLTDL TATLGSFNIY AAIGVVEVAV EKFYKYDDQA RTKTFCVDAT AAITCVYTYL KDNYSFNDKN DGSSQYLGHW NKNDMILSYS AVVSDLVDGK KIHTRMGSTP ITETKINWDY LPGGQLDKPV DKRTGLVRKF MEKDVYWPVY NSSYSEWREK HGRGGDFMIY SRPKIHKLKK PIIIKLDTLC KPSEPM
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