Gene Psyr_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0161 
Symbol 
ID3365637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp175914 
End bp176627 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID637650504 
Producthypothetical protein 
Protein accessionYP_233272 
Protein GI66043431 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.191842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAC CCACTGTTTT GCTATTGGCC CGCGCTGACC TCAGCCCGGT AGACACCGAA 
TTCACCACTG GCCCCATCGA TGCGCATGAC CCGTTCGATA ATGACCGCCG CACGGCGTTC
ATCGATGGTC AGGGCATTGC GGCCGGCCTC GTGCACTTCG GCACGTCGCT GTCAGTGGCA
GCCTACCCCT ACACCGAAAT GCTGGTGATG CATCGCGGGT CCGTCACCCT GACCTCCGGT
ACCGAGAGCC TCACGATCAA GACCGGTGAA AGTGCAGTGA TCGGTCGCGG CACTCAAGTA
CGTATCGACG CGCAACCGGA CAGCCTCTGG GCGTTCTGCG CGTCCACCCA GGCCAGCGGG
CCAGACAAAC CCGGCATCAC CGCGCTCGAC CGCCTGGCCA TGCTCACGCC ATCTTCACCA
CCAGACCCGG CGATCATGAT CAGCGCGTTG CCGCAATGCC GCAGCAACAA CCTCTTCGAA
GACAGCGCCA GCACCCTGCG CATCGGCGTG TGGGACTCCA CCCCCTACGA ACGCATCTCG
CGGCCGCACA AGATCCATGA ACTGATGAAC CTGATCGAAG GCAGCGTCGA GCTGAGCCTG
GAAAACGGCC CGAGCCTGAC CGTGAATACC GGCGATACCG TATTCGTCGC ACAGGGCGCG
CCCTGCAAGT GGACCAGTAC GGCGTATGTG CGCAAGTTTT ATGCGGTGAC GTGA
 
Protein sequence
MPRPTVLLLA RADLSPVDTE FTTGPIDAHD PFDNDRRTAF IDGQGIAAGL VHFGTSLSVA 
AYPYTEMLVM HRGSVTLTSG TESLTIKTGE SAVIGRGTQV RIDAQPDSLW AFCASTQASG
PDKPGITALD RLAMLTPSSP PDPAIMISAL PQCRSNNLFE DSASTLRIGV WDSTPYERIS
RPHKIHELMN LIEGSVELSL ENGPSLTVNT GDTVFVAQGA PCKWTSTAYV RKFYAVT