Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0161 |
Symbol | |
ID | 3365637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 175914 |
End bp | 176627 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637650504 |
Product | hypothetical protein |
Protein accession | YP_233272 |
Protein GI | 66043431 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.191842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGAC CCACTGTTTT GCTATTGGCC CGCGCTGACC TCAGCCCGGT AGACACCGAA TTCACCACTG GCCCCATCGA TGCGCATGAC CCGTTCGATA ATGACCGCCG CACGGCGTTC ATCGATGGTC AGGGCATTGC GGCCGGCCTC GTGCACTTCG GCACGTCGCT GTCAGTGGCA GCCTACCCCT ACACCGAAAT GCTGGTGATG CATCGCGGGT CCGTCACCCT GACCTCCGGT ACCGAGAGCC TCACGATCAA GACCGGTGAA AGTGCAGTGA TCGGTCGCGG CACTCAAGTA CGTATCGACG CGCAACCGGA CAGCCTCTGG GCGTTCTGCG CGTCCACCCA GGCCAGCGGG CCAGACAAAC CCGGCATCAC CGCGCTCGAC CGCCTGGCCA TGCTCACGCC ATCTTCACCA CCAGACCCGG CGATCATGAT CAGCGCGTTG CCGCAATGCC GCAGCAACAA CCTCTTCGAA GACAGCGCCA GCACCCTGCG CATCGGCGTG TGGGACTCCA CCCCCTACGA ACGCATCTCG CGGCCGCACA AGATCCATGA ACTGATGAAC CTGATCGAAG GCAGCGTCGA GCTGAGCCTG GAAAACGGCC CGAGCCTGAC CGTGAATACC GGCGATACCG TATTCGTCGC ACAGGGCGCG CCCTGCAAGT GGACCAGTAC GGCGTATGTG CGCAAGTTTT ATGCGGTGAC GTGA
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Protein sequence | MPRPTVLLLA RADLSPVDTE FTTGPIDAHD PFDNDRRTAF IDGQGIAAGL VHFGTSLSVA AYPYTEMLVM HRGSVTLTSG TESLTIKTGE SAVIGRGTQV RIDAQPDSLW AFCASTQASG PDKPGITALD RLAMLTPSSP PDPAIMISAL PQCRSNNLFE DSASTLRIGV WDSTPYERIS RPHKIHELMN LIEGSVELSL ENGPSLTVNT GDTVFVAQGA PCKWTSTAYV RKFYAVT
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