| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0158 |
|---|
| Symbol | |
|---|
| ID | 3365634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 172214 |
|---|
| End bp | 173509 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637650501 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_233269 |
|---|
| Protein GI | 66043428 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA AGGGGAACGA GATGCGCAGT GAGTCTTACT GGCTCGATAC GGCTCCAGGC
TTTACCGGCG CACAGGACGG CGCAGTGGAG GGTCAGGCTG ACGTGGTAGT GGTCGGTGGC
GGTTTCACCG GCCTTGCGGC GGCGCGTGCA TTGGCCTTGA AAGGTGCCAG CGTGGTGGTT
CTGGAAGCGG GCCGGGTGAT CGGCGAAGCG TCGGGCCGCA ATGGCGGACA GTGCAATACC
GGCGTGGCTC AGGACTATGC GTCGTTGAGC GCAACCCTGG GTGCCGATCA GGCACGCGAG
TATTACAAGG CTTACGAAAG TGCGGTGCAA AGCGTCGTGA GCGTGATCGA CGAGGAACAC
ATCGCCTGCG ACATCAAGCG TAACGGCAAG CTCAAGCTGG CGGCCAAGCC AGGGCATTAC
GAAGGACTGG CGCGCACCTG CGAGCTGATC CGCCGTGAAG TCGATGCTGA CGTCGAGCTG
CTGTCCGCTC AGGACCTGCG CGCTGAAATC GATTCGAACG AGTTTCACGG TGGCCTGCTG
CAGCGCAACG GCGTACAGAT GCATGTCGGA CGTTTCGGTG TGGGTCTCGC CGACGCAGCA
GTGCGTCATG GCGCAAGGGT GTATCAGAAC GCGACGGTAA AGGACTGGAA AGCCAACCGT
GGCGGCTTTG TGGTCAACAC CTCGAAAGGC TCGATCCAGG CCGGCCAGCT GCTGTTGGCG
ACCGGAGCCT GCCAGCATGG CGGGCTGGGC TGGTATCGCC GGCGCATCGT GCCGGTCGGC
AGCTTCGTCA TCGTCACTGA AGTGTTGCCG CAAGCGCTGA TCGACCAACT GTTCCCCCAC
CAGCGCGCTT ACGTGACCAG CCGTTTGATC GGCAACTATT TCCGCCTCAC GCCGGACAAC
CGTCTGCTGT TCGGCGGGCG CGCGCGCTTC GCCATGTCCA ACAGCAGCTC CGACGCCAAG
AGCGGCAAGG TGTTGCAGGC GGCCATGGTG CAGATGTTTC CGCAACTGGC ACACGTCAAG
GTCGACTACT GCTGGGGCGG GCTGGTGGAC ATGACCTCCG ACCGTCTGCC GCGTGCAGGC
GAACACAACG GGGTCTTCTA CTCGATGGGT TACAGCGGCC ACGGTGTACA GATGTCGGTG
CACATGGGGC GGATGATGGC CGAAGTCATG GAAGGCAAGG CACAGGCCAA TCCCTGGAAG
GACCTGAGCT GGCCAGCCAT TCCCGGCCAT TTCGGCAAGC CATGGTTTCT GCCGCTGGTA
GGCGCGTATT ACCGCTATCA GGACAGCCGC CACTGA
|
|---|
| Protein sequence | MSDKGNEMRS ESYWLDTAPG FTGAQDGAVE GQADVVVVGG GFTGLAAARA LALKGASVVV
LEAGRVIGEA SGRNGGQCNT GVAQDYASLS ATLGADQARE YYKAYESAVQ SVVSVIDEEH
IACDIKRNGK LKLAAKPGHY EGLARTCELI RREVDADVEL LSAQDLRAEI DSNEFHGGLL
QRNGVQMHVG RFGVGLADAA VRHGARVYQN ATVKDWKANR GGFVVNTSKG SIQAGQLLLA
TGACQHGGLG WYRRRIVPVG SFVIVTEVLP QALIDQLFPH QRAYVTSRLI GNYFRLTPDN
RLLFGGRARF AMSNSSSDAK SGKVLQAAMV QMFPQLAHVK VDYCWGGLVD MTSDRLPRAG
EHNGVFYSMG YSGHGVQMSV HMGRMMAEVM EGKAQANPWK DLSWPAIPGH FGKPWFLPLV
GAYYRYQDSR H
|
|---|
| |