Gene Psyr_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0152 
Symbol 
ID3365628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp165081 
End bp166490 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content65% 
IMG OID637650495 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region 
Protein accessionYP_233263 
Protein GI66043422 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.789884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTT CTTCACGGTT AGACGTTCGC AACCCTGGCA GCCCCAGAGT GGTCATCATC 
GGCGCCGGCC CGGCAGGCAC CCGCTGCGCC GAAACCTTGC TGGCTGCGGG CATCAAACCG
ATCCTGATCG ACGAAAACCG ACGTGACGGC GGGCAGATCT ATCGCCGTCA GCCAGAAGGC
TTCAAACGCG ATTATTCGGC GCTGTATGGC ACTGAAGCGG CCAAAGCGCG TGACCTGCAT
GAAAGCTTCG ATCGCTTGCG CCCGCAGATC GACTACCGCC CCGACACCCT GGCCTGGAAC
CTGACCCACG GCGAGCTGTG CTGTGCCAGT CAGGGCGTGC ACACCGTCAT CGAATACGAC
GCACTGATCC TGTGTGCCGG GGCCACCGAC CGCCTGATGC CGATCAAGGG CTGGCAGCTG
GCAGGCACCT ACAGCCTGGG CGGCTCGCAG ATTGCGCTCA AGTCGCAATC GGTCTCGATT
GGCAGTCGCG TGGTGTTCAT GGGCAGCGGT CCGCTGCTGT ACCTGGTCGC CAGCCAGTAC
GTCAAAGCCG GTGCCGATGT CGCTGCCGTG CTCGATACCT CACCGTTCGG CAAACGCGTC
AGCGCGATGC CCAAATTGCT GGCGCGCCCC GGTCTGCTGT TCAACGGCAT GAAACTGCTG
GGCCAACTGT ACAGCGCCGG GGTGCCGGTG CACCTGGGCG TGCAGCCCGA GGAAATCATC
GGCAGCGAAC AGGACGGCGT CACCGGCGTG CGTGTGAAGC TGGCCAATGG CAACGCGCTG
AGCGTCGATT GCGATGCCCT GGCGCTGGGT TATCACCTGC GTCCGGAAAC CCAACTGGCT
GATCTGGCCG GCTGCCAGTT ACGCTTCGAC GAAGCGTCCG GGCAATGGGT GCTGGCAGTC
GATGAAGAGG GGCGTACTTC GGTCAAGGGT TTTTACGCCG CAGGTGACGG CGCGAAGATT
CGTGGCGCCG ATGCCGCGGA ACAGGCCGGG CGACTGGTGG CGATGGCGCT GCTGGAAGAC
CTCGGCCGAC CTGTGGATAA CTCGCGCCAG GCAGAGGTGC GCAAGAGCCT GGTGGCGATG
GATCGCTTTC GGGTCGGGCT GGCCGAGGCG TTTCCGTGGC CTGCAGCCCA GGCGGCCGCC
TTGCCGGATG AGGCCATTGT CTGCCGCTGC GAGATGATCA GCGCCGGTGA ACTGCGCGGC
GTCGTGCGTG AAAAGGGCGC CTGCGAAGTC AACCGCGCCA AGGCTTTCAG TCGCGTCGGC
ATGGGCCGCT GCCAGGGCCG TTACTGCTCG CAGGCCGGGG CCGAGGTGAT CGCTGCCGAA
GCCGGTGTGC CGGTCGAACA GGTTGGTCGT CAGCGCGGTC AGGCACCGGT CAAACCGTTG
TCGATGCTGA TCGACGAGGT GGCATCATGA
 
Protein sequence
MATSSRLDVR NPGSPRVVII GAGPAGTRCA ETLLAAGIKP ILIDENRRDG GQIYRRQPEG 
FKRDYSALYG TEAAKARDLH ESFDRLRPQI DYRPDTLAWN LTHGELCCAS QGVHTVIEYD
ALILCAGATD RLMPIKGWQL AGTYSLGGSQ IALKSQSVSI GSRVVFMGSG PLLYLVASQY
VKAGADVAAV LDTSPFGKRV SAMPKLLARP GLLFNGMKLL GQLYSAGVPV HLGVQPEEII
GSEQDGVTGV RVKLANGNAL SVDCDALALG YHLRPETQLA DLAGCQLRFD EASGQWVLAV
DEEGRTSVKG FYAAGDGAKI RGADAAEQAG RLVAMALLED LGRPVDNSRQ AEVRKSLVAM
DRFRVGLAEA FPWPAAQAAA LPDEAIVCRC EMISAGELRG VVREKGACEV NRAKAFSRVG
MGRCQGRYCS QAGAEVIAAE AGVPVEQVGR QRGQAPVKPL SMLIDEVAS