Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0150 |
Symbol | |
ID | 3365626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 162761 |
End bp | 163918 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650493 |
Product | acetylornithine deacetylase |
Protein accession | YP_233261 |
Protein GI | 66043420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCC GCGCACTGGA AATCCTCAAG CGTCTGATCG CCTTCGACAC CGTTTCGTCG GAGCCGAACA TGGCGCTGAT CGAATACGTC CGCGAACTGC TGGCCAGCAA AGGCATCGAG TCGCTGATCG TCAAGGACGA GACCGGCAAG AAAGCCAACC TGTTCGCCAG CACCGGCCCG CGGGAAGTGC CGGGCGTGCT GCTGTCCGGC CACACCGACG TGGTTCCTGC GGCCGGTCAG GCGTGGACGA TGCCACCGTT TCAGGCGACC CTGCGTGACG GGCGCATCTA CGGCCGTGGC ACCTGCGACA TGAAGGGCTT TATCGCCCTG GCTATCGACG CGATGCTCGA TGCTGCGGAC ATGCCCCTGA CGCGCCCGCT GCAACTGGCG CTGTCCCATG ACGAAGAGAT CGGCTGCGTC GGCGTGCGGC GGCTGCTCGA CGTCCTGCAT CTGGCACCGG TACGTCCGTT CCTGTGCGTG GTTGGCGAGC CGACCCTGAT GCAGTTCGCC GTCGGTCACA AGGGCAAGGC GTCCTATCGC ACCTTCTGTC GAGGTCAGGA GGCGCATTCC TCGCTGGCCC CAAGAGCGGT CAACGCGATT CACCTGGCCA GCGACTTCAT CGCCGAACTG CGCAAGAGCC AGAAGCAGAT CGAACAGCAA GGCGCGCGTG ACGAGGGTTA CGACATCCCT TACAGCACCG TACACATCGG CCGTATCGAT GGCGGCAAGG CGCTGAACAT CGTGCCCAAC CTGTGCACCC TGGAATTCGA ATACCGCAAC CTGCCGGGCG ACAACCCCGA TGCGTTGCTG GAGCAGTTGC GCGAGCGTGC CGAGGTGCTG GTACGTGAAG CGCGACAGCT GTCGGGTGTG GCAGACATCG AGATCGAGGT CATGAACGAA TACCCGGCGC TGGAGACCCA TCCAAGCGTT GAGGCGGTGC GCCTGCTGCA CGCGTTTGCC GAGCCGGGCA CACAGCACAT CAAGGTCTCG TATGGCACCG AGGGCGGCCT GTTCGCCGGG CGCCTCAACG TGCCGGTCGT GGTTTGCGGT CCGGGTTCCA TCGAGCAGGC ACACAAGCCG GACGAGTTTA TCGACGAGAG CCAGATGGAC GCAGGCGAGC GCTTTTTGCA GAGCCTGCTG GGCTCGCTGA AGCAGTAG
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Protein sequence | MSPRALEILK RLIAFDTVSS EPNMALIEYV RELLASKGIE SLIVKDETGK KANLFASTGP REVPGVLLSG HTDVVPAAGQ AWTMPPFQAT LRDGRIYGRG TCDMKGFIAL AIDAMLDAAD MPLTRPLQLA LSHDEEIGCV GVRRLLDVLH LAPVRPFLCV VGEPTLMQFA VGHKGKASYR TFCRGQEAHS SLAPRAVNAI HLASDFIAEL RKSQKQIEQQ GARDEGYDIP YSTVHIGRID GGKALNIVPN LCTLEFEYRN LPGDNPDALL EQLRERAEVL VREARQLSGV ADIEIEVMNE YPALETHPSV EAVRLLHAFA EPGTQHIKVS YGTEGGLFAG RLNVPVVVCG PGSIEQAHKP DEFIDESQMD AGERFLQSLL GSLKQ
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