Gene Psyr_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0150 
Symbol 
ID3365626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp162761 
End bp163918 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content64% 
IMG OID637650493 
Productacetylornithine deacetylase 
Protein accessionYP_233261 
Protein GI66043420 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCC GCGCACTGGA AATCCTCAAG CGTCTGATCG CCTTCGACAC CGTTTCGTCG 
GAGCCGAACA TGGCGCTGAT CGAATACGTC CGCGAACTGC TGGCCAGCAA AGGCATCGAG
TCGCTGATCG TCAAGGACGA GACCGGCAAG AAAGCCAACC TGTTCGCCAG CACCGGCCCG
CGGGAAGTGC CGGGCGTGCT GCTGTCCGGC CACACCGACG TGGTTCCTGC GGCCGGTCAG
GCGTGGACGA TGCCACCGTT TCAGGCGACC CTGCGTGACG GGCGCATCTA CGGCCGTGGC
ACCTGCGACA TGAAGGGCTT TATCGCCCTG GCTATCGACG CGATGCTCGA TGCTGCGGAC
ATGCCCCTGA CGCGCCCGCT GCAACTGGCG CTGTCCCATG ACGAAGAGAT CGGCTGCGTC
GGCGTGCGGC GGCTGCTCGA CGTCCTGCAT CTGGCACCGG TACGTCCGTT CCTGTGCGTG
GTTGGCGAGC CGACCCTGAT GCAGTTCGCC GTCGGTCACA AGGGCAAGGC GTCCTATCGC
ACCTTCTGTC GAGGTCAGGA GGCGCATTCC TCGCTGGCCC CAAGAGCGGT CAACGCGATT
CACCTGGCCA GCGACTTCAT CGCCGAACTG CGCAAGAGCC AGAAGCAGAT CGAACAGCAA
GGCGCGCGTG ACGAGGGTTA CGACATCCCT TACAGCACCG TACACATCGG CCGTATCGAT
GGCGGCAAGG CGCTGAACAT CGTGCCCAAC CTGTGCACCC TGGAATTCGA ATACCGCAAC
CTGCCGGGCG ACAACCCCGA TGCGTTGCTG GAGCAGTTGC GCGAGCGTGC CGAGGTGCTG
GTACGTGAAG CGCGACAGCT GTCGGGTGTG GCAGACATCG AGATCGAGGT CATGAACGAA
TACCCGGCGC TGGAGACCCA TCCAAGCGTT GAGGCGGTGC GCCTGCTGCA CGCGTTTGCC
GAGCCGGGCA CACAGCACAT CAAGGTCTCG TATGGCACCG AGGGCGGCCT GTTCGCCGGG
CGCCTCAACG TGCCGGTCGT GGTTTGCGGT CCGGGTTCCA TCGAGCAGGC ACACAAGCCG
GACGAGTTTA TCGACGAGAG CCAGATGGAC GCAGGCGAGC GCTTTTTGCA GAGCCTGCTG
GGCTCGCTGA AGCAGTAG
 
Protein sequence
MSPRALEILK RLIAFDTVSS EPNMALIEYV RELLASKGIE SLIVKDETGK KANLFASTGP 
REVPGVLLSG HTDVVPAAGQ AWTMPPFQAT LRDGRIYGRG TCDMKGFIAL AIDAMLDAAD
MPLTRPLQLA LSHDEEIGCV GVRRLLDVLH LAPVRPFLCV VGEPTLMQFA VGHKGKASYR
TFCRGQEAHS SLAPRAVNAI HLASDFIAEL RKSQKQIEQQ GARDEGYDIP YSTVHIGRID
GGKALNIVPN LCTLEFEYRN LPGDNPDALL EQLRERAEVL VREARQLSGV ADIEIEVMNE
YPALETHPSV EAVRLLHAFA EPGTQHIKVS YGTEGGLFAG RLNVPVVVCG PGSIEQAHKP
DEFIDESQMD AGERFLQSLL GSLKQ