Gene Psyr_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0145 
Symbol 
ID3365621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp157566 
End bp158240 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content63% 
IMG OID637650488 
Producthypothetical protein 
Protein accessionYP_233256 
Protein GI66043415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGT TGCCTGCCAT GGGGCTTATT GATTACCGCG CACTGCTGAT CGATTGTGAT 
GAAGTGCTGG TGGACCGTGA TTCGGGGGTC TGGTCGGCGT TGCAGCCATT GCTGGACAAC
AGCCTGAGCA CGCCGGCGAA AGACCAGGTG CTGATCGAAT TCAATGACGT GGTCCGCACC
TTGTACCCAC GCTTTGACGA ACTGGGCTTC AGCGGCCTGC TGTGCTTCGC GCACCGCCAG
CTGGCCGAAC GCCTGGGCAT CAAGGCCAGT TGGGAAGAGG GCATGACCTT CGCCCGCTCC
GTGCCGAACT GGACGCTGTT CGAAGATGCG CCCGGTGCGA TGCTCTACCT GCGCAAGTTC
TATCGATTGC TGGTGTATGC CGACCGCGAC ATGCAGGATC GCGGCCTTCT GTGCGAGCGA
CTGGGGCTGG AGCCCGACAG CCTGCTGTCA CTGACCACCC ACCCGCTGGA CGACACGGGC
TGGCTTGCCG ATATGGATCT GGAGCCGCGC GAAACCCTGT TTGTCTCCCG CCCCCCGGCC
TCGGCGCTGG CGAGCGGTGG GTTGTGCCTG ATCCGGCGTG GTCGGGAACA GCACAGCCAG
CCCTGCACGG CGGATATCTG TATCAACAGC ATGGCTGATC TGGTCGCTCA GCATCAGCTG
TCTTTACGGC GCTGA
 
Protein sequence
METLPAMGLI DYRALLIDCD EVLVDRDSGV WSALQPLLDN SLSTPAKDQV LIEFNDVVRT 
LYPRFDELGF SGLLCFAHRQ LAERLGIKAS WEEGMTFARS VPNWTLFEDA PGAMLYLRKF
YRLLVYADRD MQDRGLLCER LGLEPDSLLS LTTHPLDDTG WLADMDLEPR ETLFVSRPPA
SALASGGLCL IRRGREQHSQ PCTADICINS MADLVAQHQL SLRR