| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0139 |
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| Symbol | |
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| ID | 3365615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 149457 |
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| End bp | 151340 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637650482 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_233250 |
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| Protein GI | 66043409 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTC TTAACCGTTT TCTGCGGCGC CTGCTTCTGG GTGTTGCGCT GTGCAGTGGC
TGGCAGACAG TGCTGGCGAC GCCGACCCAC GCCTTGACCG TCTATGGCGA GGCAGCGAAA
TACCCGGCCG GCTTCCAGCA CTTCGATTAC GTCAACCCGA ACGCCCCCAA GGGTGGTTCG
CTGACCCGGT CGGCGGAAGA AATCGGCCAG TTCAATTACC TCAATCCCTA CGTCGATCAG
GGCATCAATG TGCGCGAGGT CGACAGCTGG GTGTACTCGC CACTGGCCTA TCGCTCGCTG
GATGAGCCGT ACACGGTGTA TGGCCTGATC GCGGAAAAGA TGGAGATGGA CCCCGACGGT
CTGTGGATTC GTTTTTTCCT CAACCCCAAG GCGCGTTTCG AGGACGGCAA GCCCGTCACC
GCCGAAGACG TGCGCTACAC CTTCGAGCTG ATGACCACCA AGGGCAGCTT CAGCTATCGA
CCGATGTTCG CCGACGTCAA AGAGGTGACC ATCGAAGGCC CGCTGCAGAT TCGCTTCGAC
TTCAAGAACA ACCTCAACCG CATGCTGGCG CTGGACATTG CCAGCCTGCA CATCCTCCCC
GAACACTGGT GGAAGACCCG CGACTTCGCC AACGGCGGCG GTTTCGAGCC GCCGCTGGGC
AACGGGCCGT ACCGGGTCGC CAAGGTCGAC GCCGGACGCA GCGTCACCTT CGAACGGGTC
AAGGACTGGT GGGGCAAGGA CCTGCCGGTC AGCCGTGGCC TGTACAACTT CGACATGCTT
ACCGTGAACT ACTACGGCGA CACCGAAATC GCTCGCCAGC TGCTGCAGGC CGGGACGTTC
GACTACAACC GCGAGTTCTC CTCTTCCGGC TTCGTGGTCG GCTACAGCGG CCCGGCAATT
GACGACGGGC GTCTGCAAAA GCGCATCCTC GCCCGGCAGC GTCCGGTCGC CGCACAGGGC
TTTGTGTTCA ATCTGGACAA ACCCATGTTC AAGGACCGCC GCGTCCGCGA GGCGCTGTCG
TTGCTGTGGG ATTTCGACTG GATCAATCGC CGGGTCATGC GCAATTTCTA CGTGCGCGAA
CAAAGCTACT TCCCGAAAAG CGACATGGCC GCCACCGAGC TGCCGACCCC GGCCGAGCTG
AAGATCCTCG AGCCCTTGCG CGGCCAGGTG CCGGACGAGG TGTTCAGCAA GGTCTACCAG
CCACCGAAAA CCGACGGCAG CGGCTACATC CGTGACAAGC AGTTGCAGGC CCTCAAGCTG
CTGGCCGAGG CCGGCTGGCA CCCGAAGGAC AACAAGCTGG TCAACGCTGC GGGCGAGCCG
ATGGTGTTCA GTTTTCTCGA TGGTCAGGGC GGCTTCGACC GGCTGATTCT GCCCTTCAAG
CGCACGCTGG CGCAGATCGG CATCACCCTG GATTTCCTGC GCATCGATTC GGCGCAGTAC
ATCAACCGGC TCAATGCGCG GGACTACGAC ATGATCGTGG TCAGCCTGCC GAAAAACGGC
AATCCGATCA TCTCCCCGGG CCGTGAGCTG TACAACCTGT ACGGCTCGCA AAGCGCCACC
GAAGTGGGCA GCTCCAACGC CATGGTGCTG CGCAATCCCG CGGTGGACAC GCTGATCGAC
GGGCTGGTCA GCGCCAATAC GCGCAACGAC ATGGTGCTCT ACGCGCGGGC GCTGGATCGG
GTCCTGCAAT GGGGTTACTA CATGATTCCC AACTACTACT CCAAGGGCAC GCCGCTGGTG
TTCGCCAACC GTTTCGGCAT GCCCGACGTG GCACCGATCT ATGACGTGGG CCTGGAAACC
TGGTGGCAGA TCAGCCCGAC GCCGCTGACC AATGCTCAGG CCACTGCGCT GACCGGCAAG
CCTGCCGCCG CCAAGGAGTA CTGA
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| Protein sequence | MSRLNRFLRR LLLGVALCSG WQTVLATPTH ALTVYGEAAK YPAGFQHFDY VNPNAPKGGS
LTRSAEEIGQ FNYLNPYVDQ GINVREVDSW VYSPLAYRSL DEPYTVYGLI AEKMEMDPDG
LWIRFFLNPK ARFEDGKPVT AEDVRYTFEL MTTKGSFSYR PMFADVKEVT IEGPLQIRFD
FKNNLNRMLA LDIASLHILP EHWWKTRDFA NGGGFEPPLG NGPYRVAKVD AGRSVTFERV
KDWWGKDLPV SRGLYNFDML TVNYYGDTEI ARQLLQAGTF DYNREFSSSG FVVGYSGPAI
DDGRLQKRIL ARQRPVAAQG FVFNLDKPMF KDRRVREALS LLWDFDWINR RVMRNFYVRE
QSYFPKSDMA ATELPTPAEL KILEPLRGQV PDEVFSKVYQ PPKTDGSGYI RDKQLQALKL
LAEAGWHPKD NKLVNAAGEP MVFSFLDGQG GFDRLILPFK RTLAQIGITL DFLRIDSAQY
INRLNARDYD MIVVSLPKNG NPIISPGREL YNLYGSQSAT EVGSSNAMVL RNPAVDTLID
GLVSANTRND MVLYARALDR VLQWGYYMIP NYYSKGTPLV FANRFGMPDV APIYDVGLET
WWQISPTPLT NAQATALTGK PAAAKEY
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