Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0137 |
Symbol | |
ID | 3365613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 145986 |
End bp | 146387 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650480 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_233248 |
Protein GI | 66043407 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.421309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCT CCACTCAGGA CAGCGATGAA GTGCTCAGCG AAATGAACGT CACGCCGCTG GTCGACGTGA TGCTCGTGCT GCTGGTGGTG TTCATCGTCA CCACGCCGCT GATGACCAAC GCGATCAAGG TCAACCTGCC CAAGACCGAC GCGGTCGCTC CCGCCGAGAA GAAAAACCCG GTGGTGGTCA GCGTCGATCA GGACGGCAAG TTCTACCTCG CCAAATCGGA AATCGCCCCG GAGCTGCTGG AAAAAAGCCT GCAGGACGAA AAGGCCAAGG ACCCGGAAAT CCGCGTCCAG TTGCAGGCCG ACACCGCCGT GAATTATGGC CAGGTGGCCA AGGCCATGGC CTCCATCGAA CGCTCCGGCA TTACGAAGAT ATCCGTCATG ACAGCGAAAT GA
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Protein sequence | MSFSTQDSDE VLSEMNVTPL VDVMLVLLVV FIVTTPLMTN AIKVNLPKTD AVAPAEKKNP VVVSVDQDGK FYLAKSEIAP ELLEKSLQDE KAKDPEIRVQ LQADTAVNYG QVAKAMASIE RSGITKISVM TAK
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