Gene Psyr_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0137 
Symbol 
ID3365613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp145986 
End bp146387 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID637650480 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_233248 
Protein GI66043407 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.421309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTCT CCACTCAGGA CAGCGATGAA GTGCTCAGCG AAATGAACGT CACGCCGCTG 
GTCGACGTGA TGCTCGTGCT GCTGGTGGTG TTCATCGTCA CCACGCCGCT GATGACCAAC
GCGATCAAGG TCAACCTGCC CAAGACCGAC GCGGTCGCTC CCGCCGAGAA GAAAAACCCG
GTGGTGGTCA GCGTCGATCA GGACGGCAAG TTCTACCTCG CCAAATCGGA AATCGCCCCG
GAGCTGCTGG AAAAAAGCCT GCAGGACGAA AAGGCCAAGG ACCCGGAAAT CCGCGTCCAG
TTGCAGGCCG ACACCGCCGT GAATTATGGC CAGGTGGCCA AGGCCATGGC CTCCATCGAA
CGCTCCGGCA TTACGAAGAT ATCCGTCATG ACAGCGAAAT GA
 
Protein sequence
MSFSTQDSDE VLSEMNVTPL VDVMLVLLVV FIVTTPLMTN AIKVNLPKTD AVAPAEKKNP 
VVVSVDQDGK FYLAKSEIAP ELLEKSLQDE KAKDPEIRVQ LQADTAVNYG QVAKAMASIE
RSGITKISVM TAK