Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0136 |
Symbol | |
ID | 3365612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 145279 |
End bp | 145986 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650479 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_233247 |
Protein GI | 66043406 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.638399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAT CGCTCTCTTC CATGATCGTC CCCGCCGTGC TCTGGGCACT GATTCTGTTT TCCGTATTGA GTTGGGCACT GTTGCTGATC AAGTCGGCGC AGTACGTCCG CCAGAAGTCC CAGAACAAGC AATTCACCAA AGCCTTCTGG AGCGCACCGG ACCTGCTCAC TGCGGCCGAG CACTCCGCGC AATACCCCGG CGCGCTGGCG CGTATTGCCA ACAGCGGCTT CGAAGCCATG GCGGTTGACG AGTCGCCGCG CACCACGCAA CAACTGGCGC ACACCATCAA CCGCTCGGAC CGTCTGGAGC GCAACCTGCG CCAGCAGATA CAGAAAGAGC GTCGCGCGCT GGAAAGTGGC CAGGCGATTC TCGCCAGTAT CGGCAGCACC GCGCCCTTCA TCGGCCTGTT CGGTACGGTC TGGGGGATCA TGGAAGCGCT GCAAAGCATC GGCGTGACCG GCTCGGCCAG CCTCGAAGCG GTCGCCGGCC CCATCGGTCA TGCGTTGGTC GCCACCGGTG TGGGTATCGC CGTCGCCGTG CCGGCAGTGC TGATCTACAA CTTCTTCCTG CGCCGCCTCA AGCTCGCCGT GGCCGACATG GATGACTTCG CCCACGACTT CGACGCCCTC GCCCAGCGCA GCGCCTTTGC CGTTACACGC CAGCCCATCG CCAGCAAGAA TGGTCATGCC GTTCGGGAGG CCAGCTAA
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Protein sequence | MNASLSSMIV PAVLWALILF SVLSWALLLI KSAQYVRQKS QNKQFTKAFW SAPDLLTAAE HSAQYPGALA RIANSGFEAM AVDESPRTTQ QLAHTINRSD RLERNLRQQI QKERRALESG QAILASIGST APFIGLFGTV WGIMEALQSI GVTGSASLEA VAGPIGHALV ATGVGIAVAV PAVLIYNFFL RRLKLAVADM DDFAHDFDAL AQRSAFAVTR QPIASKNGHA VREAS
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