Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0135 |
Symbol | |
ID | 3365611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 144401 |
End bp | 145225 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650478 |
Product | TonB, C-terminal |
Protein accession | YP_233246 |
Protein GI | 66043405 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATG CGGTCATAAT GAAAGCGGTC CCCTCTCCCT CGCCCGATGA CACTTCGACG GCGTGGCAGG GTATTCCTTT CAGCGCCAAT ACGTCACGCC CGGGCGGCCT TAACAAGCCG CAAGTAATGG TGTTGATTGC TGCGTCGGTA CTTATTCATG GTGTGATCTG GTGGTACATG CAAACGGCCC AGCCAGACGT GCCGGAAGTT GCGCCACAAG TTCCGGAAAT GACCATTGAA CTGACCAGCC CGACACCACC CGCACCGGAA CCGCCGCCGC CCGAGCCACC ACCTCCGCCG CCGCCTCCAC CGCCTCCCCC CGAACCGGAA CAACCGGTCG AGGACCCGGA CGCGGTCGAA CCGCCGCCCA AACCGGTGGA AAAACCCAAG GTCGAGAAGC CCAAGCCGGT CAAGAAAGTC GAACCGGTGA AAAAGCCTAC GCCGCCTGCG CCAACGCCTG CCGCCGCACC CAGCCCGCCC GCGCCGCCAA CACCTGCGCC CGCGCCGCCG GCACCTGCTG CGCCACCGGC TCCGGTCAAG GAAAGCGCTG CGGTATCCGG GCTCGCCAGC CTGGGCAATC CACCGCCGGA ATACCCGGGG CTGGCCTTGC GACGCAGTTG GGAAGGTCGC GTGATTCTGC GCATCAAGGT GCTGCCCAAT GGCCGCGCCG GGGCTGTCGA GGTGACCAAA TCCAGCGGCA AACCGGTACT GGACGAAGCG GCCGTGGAGG CTGTGCGCAA CTGGAAGTTC ATACCGGCCA AACGCGGTGA CACGCCGATA GAAGGCTTCG CGACGCAGAC CATCGACTTC AAGTTGCCGG AATGA
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Protein sequence | MNDAVIMKAV PSPSPDDTST AWQGIPFSAN TSRPGGLNKP QVMVLIAASV LIHGVIWWYM QTAQPDVPEV APQVPEMTIE LTSPTPPAPE PPPPEPPPPP PPPPPPPEPE QPVEDPDAVE PPPKPVEKPK VEKPKPVKKV EPVKKPTPPA PTPAAAPSPP APPTPAPAPP APAAPPAPVK ESAAVSGLAS LGNPPPEYPG LALRRSWEGR VILRIKVLPN GRAGAVEVTK SSGKPVLDEA AVEAVRNWKF IPAKRGDTPI EGFATQTIDF KLPE
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