Gene Psyr_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0134 
Symbol 
ID3365610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp142016 
End bp143203 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID637650477 
Productaminotransferase, class V 
Protein accessionYP_233245 
Protein GI66043404 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTTGA CTCGATTACA AAGCGAATTG CCCATGACCA CCTCTGCGCT CTATCTGGAT 
TACGCCGCTA CCACACCTGT CGACGGACAG GTCATCGAAG CCATGGTTGC CTGCATGGGG
CGCGAAGGTC ATTTCGGTAA TCCGGCATCC AGCGGGCACG GTTATGGGCA GGTGGCGCGG
CAGGCCGTTG AACAGGCACG CGCGCAGGTG GCCGATGCGG TGGGTGCGCC TGTCGACACC
ATTGTCTGGA CCTCCGGCGC TACCGAGTCC AACAACCTGG CGATCAAAGG CATCGCTCAT
GATGCCAGCG CGCCACGCCG GCACATCATC ACCAGCGTCC TGGAACACAA GGCCGTGCTC
GACACCGTCA GCACGCTGGA GCGTCAGGGC TTTCCCGTCA CCTGGCTGAA ACCGGACGCT
CAAGGCCTGA TCCAGCCTCA CGCGGTACAG GCTGCCTTGC GCGAAGACAC GCTGCTGGTG
TCGCTGATGC TGGTGAACAA TGAACTGGGT ACGCTGACCG ATATCGCCAG CATTGGCGCC
CTGGTGCGCG AGCACGGTGC GCTGTTTCAT GTGGACGCTG CGCAGGGCGT CGGCAAGGTG
AAGGTCGATC TGGCGAGTCT GGCCGTCGAC CTGATGTCGT TCTCGGCGCA CAAGGCCTAC
GGCCCCAAGG GCATAGGCGC GCTGTACGTG GGCCCGCGTG CTCACTCGTT GTTGAAAGCG
CAGATTCACG GCGGCGGACA TGAAGGTGGC TTTCGTTCGG GCACATTGGC CACCCATCAG
ATCGTCGGCA TGGGGACGGC CTTTGCGTTG GCGATCAGCC AGGCCGAAAC TGAAAACCGT
CGTATCGAAG AGCTGAGTCG TCACCTGCGC GAAGGCCTGT TGAGTCTGCC GGATGTGCAA
CTCAACGGCT GTCCGCAACA ACGCATCCCG CACACCCTGA ACCTGTGCAT CACCCGCAGT
GGCTTCACCA GCTCGCAGTT GTCCCACAGC CTGGCGTTGT CCTCGACGTC CGCGTGCAAC
TCGGCCAGCA ATGCACCCTC GCATGTGCTG CTTGCTCTGG GCATGGACTC TGCCAAGGCC
CTGGCCAGCG TGCGCGTCAG CCTCGGCCGC TACACCACGC AGGCAGATGT CGAGCGCGCC
ATCGAGGTGT TCAGCAAGGC GCTCAGCGCA CCTGCTGCGT TCTGGTAA
 
Protein sequence
MILTRLQSEL PMTTSALYLD YAATTPVDGQ VIEAMVACMG REGHFGNPAS SGHGYGQVAR 
QAVEQARAQV ADAVGAPVDT IVWTSGATES NNLAIKGIAH DASAPRRHII TSVLEHKAVL
DTVSTLERQG FPVTWLKPDA QGLIQPHAVQ AALREDTLLV SLMLVNNELG TLTDIASIGA
LVREHGALFH VDAAQGVGKV KVDLASLAVD LMSFSAHKAY GPKGIGALYV GPRAHSLLKA
QIHGGGHEGG FRSGTLATHQ IVGMGTAFAL AISQAETENR RIEELSRHLR EGLLSLPDVQ
LNGCPQQRIP HTLNLCITRS GFTSSQLSHS LALSSTSACN SASNAPSHVL LALGMDSAKA
LASVRVSLGR YTTQADVERA IEVFSKALSA PAAFW