Gene Psyr_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0133 
Symbol 
ID3365609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp140694 
End bp141164 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID637650476 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_233244 
Protein GI66043403 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAT TCGACCGGGC AATCCTTGAC ATCCTGCAAA CCGACTGCAC CCGCTCAGTC 
GCAGACATCG CCGAGCGTAT CGGCCTGGGC AGTACCGCGT GCTGGCGGCG TATCCAGAAG
CTGGAAGAAG CCGGCATCAT CGACCGCCGG GTCGCGCTGC TCAATCCGCA AAGGCTGAAC
GTGTCAGTCA GCGTCTTCGC CGCCATCCGC ACCAACCAGC ACAACGCCGC CTGGCTCGAA
CAGTTTCACG CTGCTGTAGG CGAGCTGCCT GAAGTGGTCG AGTGCTACCG CATGGCAGGT
GACACCGACT ACATGCTGCG CATCGTCGTG GCCGCCATTG CAGGGTACGA CGCGGTGTAC
AAGCAACTGA TCAGCATCCC CGGCATCAGC GACGTGAGCT CCAGCTTCGC CATGGAACAG
ATCAAATTCA CCACCGGTCT GCCCTTGCAA TACGCATCGT TTGGCGGCTG A
 
Protein sequence
MDKFDRAILD ILQTDCTRSV ADIAERIGLG STACWRRIQK LEEAGIIDRR VALLNPQRLN 
VSVSVFAAIR TNQHNAAWLE QFHAAVGELP EVVECYRMAG DTDYMLRIVV AAIAGYDAVY
KQLISIPGIS DVSSSFAMEQ IKFTTGLPLQ YASFGG