Gene Psyr_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0126 
Symbol 
ID3365602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp135970 
End bp136410 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content54% 
IMG OID637650469 
Producthypothetical protein 
Protein accessionYP_233237 
Protein GI66043396 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.845594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTTT GTCGTGGTTG TGCAAAGGAA ATCAGTGATG ACGCTGGTAC GTGTCCGCAC 
TGCGGGGCTC CGCAGCTGGT TATTTCGCCA GCCAGTGCGA GCACCGATAA CCCGCCTGCG
TGGAGCTGGT ATACAGACGT TCTGAAAAAA TATGCGGTGT TCACGGGCAG AGCACGCAGA
AAAGAATACT GGATGTTTTT TCTGTTCAAC ATCTTGATCT CGATTGTCCT CGGCTTTATC
GGCGGGCTGA TAGGTGATGG CGGCATTATC GCTAACCTTT ACTCCCTGGC CGTGCTGGTC
CCAGGTGTCG CGGTGGGTGT TCGCAGGTTG CACGACACGG ATCGCAGTGG CTGGTGGCTG
CTGGTACCGA TTGCCAACCT TGTGTTCCTG ATTCAGGAAG GTCATCCAGG ACCGAACCGT
TTTGGGCCAA GTCCTAAGTA A
 
Protein sequence
MVFCRGCAKE ISDDAGTCPH CGAPQLVISP ASASTDNPPA WSWYTDVLKK YAVFTGRARR 
KEYWMFFLFN ILISIVLGFI GGLIGDGGII ANLYSLAVLV PGVAVGVRRL HDTDRSGWWL
LVPIANLVFL IQEGHPGPNR FGPSPK