| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0123 |
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| Symbol | |
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| ID | 3365599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 132718 |
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| End bp | 133539 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637650466 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_233234 |
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| Protein GI | 66043393 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.623791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATA AACTGACATC CAGGATCGCG ATCATTACAG GTGCGGCTCA AGGGATCGGC
GCCGCGATTG CGCGACGGTT TTTACAGGAA GGCTGCTTTG TTTACGTCAC TGATATAAAC
GACGTACTCG GAAGAGAGAC AGCAAGAGCA TTGGGAGATC GTGCCTGTTA TCTGCATCTT
GATGTGCGCT GCGAAGAAGA TTGGCAGCGA GTGACAGCGC ATGTCGTAAA AGCGCACGGC
CGCCTCGATG TACTGGTCAA CAACGCGGGC ATTACCGGGT TTGAGCAGGG CGCTGTCCAG
CACGACCCAG AGCATGCGCG TCTGGAGGAC TGGCAAGCCG TACATCACAC CAATCTCGAT
GGTGTGTTTC TCGGGTGCAA GTACGCTATA CGAGCCATGC GCCATACGGA AACGGGTTCC
ATTATCAACA TCTCCTCTCG CTCCGGGCTG GTCGGTATTC CTGGCGCTGC TGCGTACGCG
TCGTCCAAGG CCGCCGTTCG CAATCACACC AAGACGGTGG CGCTTTACTG CGCCGAGCAA
GGATTGAAAG TTCGATGCAA CTCGATCCAT CCGGCCGCCA TCCTCACCCC TATATGGGAG
CCCATGTTGG GTGCTGATGC AGGTCGTGAA GAGCGAATGG CTGCACTTGT TCGAGACACT
CCACTCAGAA GATTTGGTAT GCCTGAAGAA GTGGCGGCTG TGGCCCTGTT ATTGGCCACC
GATGAGGCTA CGTACATTAC CGGCAGCGAG TTCAACATTG ATGGAGGTCT GTTGGCGGGT
TCGGCAGCGA CGCCAGTGGT ATTGGATGAC AGCGAAACCT GA
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| Protein sequence | MDNKLTSRIA IITGAAQGIG AAIARRFLQE GCFVYVTDIN DVLGRETARA LGDRACYLHL
DVRCEEDWQR VTAHVVKAHG RLDVLVNNAG ITGFEQGAVQ HDPEHARLED WQAVHHTNLD
GVFLGCKYAI RAMRHTETGS IINISSRSGL VGIPGAAAYA SSKAAVRNHT KTVALYCAEQ
GLKVRCNSIH PAAILTPIWE PMLGADAGRE ERMAALVRDT PLRRFGMPEE VAAVALLLAT
DEATYITGSE FNIDGGLLAG SAATPVVLDD SET
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