Gene Psyr_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0118 
Symbol 
ID3365594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp128434 
End bp129486 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content53% 
IMG OID637650462 
Producthypothetical protein 
Protein accessionYP_233230 
Protein GI66043389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.454348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGC TTGACGCTAT CCAACGCGAA AACACTGGCT TTGAGACAAC CCTAATTAAG 
GGCATCGAAC CGATCCGGCA GTTCGTTCTG GCTATATCAA TTTATCACCT GTTCGATACA
AAATTATTTT CCTTGCTGAT TAAACACCCG GTTGCCTCGC TGGATGTGGC CTGTCATGAG
CTCGGGATGG ATAAAGAGAA ACTACTTGGT TTATTCAGGT ACCTGAAGAA CGAAGGGATT
CTTCTGGAAA CAATAGACGG TTTCTCATTA TCAAAAGAAG GGCACGCGCT GGCACCTTTC
GAAGGCTGGT ATGTGATGCT GGTCGGCGGC TATGCCACCA CTTTTCTACA AATGGGCGAA
CGCCTTCAGG AGGGCGCTGG CTGGGCCACC CGCGACGCAA CCAAGGTCGG CGTAGGTAGC
TGTGGTATCA GCCACTTCGA CGCGATCCCC TTGACCAGGT CTTTGATGGC CAAAGCTCCC
GGTACATGCA CAAAACTGCT GGACCTGGGT TGCGGAAACG GGCGATACCT CGCCGAATTC
TGCAAGGCCC TTCCGCAGAT ACAGGCTTGG GGCGCCGAAC CGGACCGCGG AGGCTTCGAG
GAGGCTGTAG ACCTGATCGA AAAAGAAGGT CTGTCGCATC GGGTTCACAT CAGCCACAGC
GGGGCAGTCG AATTCCTGGA TTCGGATTTT AATTTCGAGC CCGATTTCAT CGTGCTGGGT
TTTGTGCTGC ATGAGATCCT TGGCCAGGCC GGTCGACCGG CAGTGATCAA CTTCCTGAAA
AAGATTGTCC ACCGTTTCCC CGCAATCAAC CTGATCATTA TCGAAGTCGA CAACCAATTC
GACAATGCCG GCGCAATGCG CCACGGCTTA GCACTCGCTT ATTACAACCC TTACTATCTG
TTGCATTGCT TCACCAATCA ATTGTTGGTG CAGGACGCTG ATTGGCTGGA TATTTTCGCC
GAGGCTGGCT TGTCCCTGAT CACCCGCGAG ACGACGTCTG ACCAGGTTGA CTCGACCGGT
CTGGAAATCG GCTATCTGCT GCGGAGGGCA TGA
 
Protein sequence
MTLLDAIQRE NTGFETTLIK GIEPIRQFVL AISIYHLFDT KLFSLLIKHP VASLDVACHE 
LGMDKEKLLG LFRYLKNEGI LLETIDGFSL SKEGHALAPF EGWYVMLVGG YATTFLQMGE
RLQEGAGWAT RDATKVGVGS CGISHFDAIP LTRSLMAKAP GTCTKLLDLG CGNGRYLAEF
CKALPQIQAW GAEPDRGGFE EAVDLIEKEG LSHRVHISHS GAVEFLDSDF NFEPDFIVLG
FVLHEILGQA GRPAVINFLK KIVHRFPAIN LIIIEVDNQF DNAGAMRHGL ALAYYNPYYL
LHCFTNQLLV QDADWLDIFA EAGLSLITRE TTSDQVDSTG LEIGYLLRRA