Gene Psyr_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0100 
Symbol 
ID3365576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp112435 
End bp112968 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content49% 
IMG OID637650444 
Producthypothetical protein 
Protein accessionYP_233212 
Protein GI66043371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGG ATCCCCAATC AATTGATACC AATAAAGTAG CGCACTGCAC TTTTGAATTG 
ACAGGCCAGC CCATGAGCCT GCTCAAGTGC AGTAATAATG AAAGCTACGA GGCTTTTTCT
GGAATAACTG GCTATGCCAA TGATCCTGCC CAAGTGAGCA GCGCGAAAAA CGGGCCGCTC
CCGCCGGGCC GCTACTATAT TCTGAACAGG GAAAGTGGAG GGAGACTGGG CTGGCTGAGA
GACCCCATAA CTGACCTAAT TGCAAGAACC GATCGCAGCG ATTGGTTCTC ACTGTACCGG
GACGATGGGG AAATTGATGA TCGCACAATA ATTGACAACG TTGAAAGAGA AAACTTCAGG
CTGCATCCTG TAGGCCCGTT AGGCTTGAGC GAGGGGTGTG TGACAATGAC ATCAAAACTC
GGTTTTGAGC AACTGAGTAT TTACCTACAC AACATGGAAG GGGATAGGCT TCCAGGTTCC
GGACAAAAAT ATTTCGGAAT CCTAGACGTT ATCGACCCGA GGAATACCAA GTGA
 
Protein sequence
MPMDPQSIDT NKVAHCTFEL TGQPMSLLKC SNNESYEAFS GITGYANDPA QVSSAKNGPL 
PPGRYYILNR ESGGRLGWLR DPITDLIART DRSDWFSLYR DDGEIDDRTI IDNVERENFR
LHPVGPLGLS EGCVTMTSKL GFEQLSIYLH NMEGDRLPGS GQKYFGILDV IDPRNTK