Gene Psyr_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0098 
Symbol 
ID3365574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp109452 
End bp111323 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content43% 
IMG OID637650442 
Producthypothetical protein 
Protein accessionYP_233210 
Protein GI66043369 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCA AAGAAACCTA CTTGGGCGAT GTCCAAGATG TAAACGGGAC GGCGGTTAGC 
ATTTCATTAT CCAAGCAGTC ATTAACAGGT TTCATTTATA TTGACGGCCA AGGATATAGG
GTCGGACAGA TTGGTAGTTT TGTAAGAATA CCCATAGGCT TTTCTGACTT ATTTGGAATT
GTGAGTCAAG TAGGTGCAAG CGCTGTACCA GAAAATAAAA ATATCATCAA AGATCAAAGT
AATAGATGGA TGAGAATCCA GCTTGTCGGT GAGGGTCAAC GAAATGGTTC ATTTCAACGA
GGTCTATCTC AGTACCCCAC AATTGGGGAT GAGGTTCATT TAGTATCCGA AAAGGAACTA
AAAACAATTT ATGGCCGTCC AGATCGACCA TACTTCGTTA AGTTAGGTCA TATCTCAAAT
GCTGAATCTA TACCGGCCCT GATTGACATT AATAAGCTTG TCACTCGTCA CTCCGCTATC
GTTGGTACGA CAGGATCTGG TAAGTCCACA ACGGTGGCAA GCATCATGAA TGCGTTGTCC
GACACTGAGA AATATCCTTC TTCGCGAATT ATCATGCTCG ACTTACATGG GGAGTATGGT
TCTGCTCTTA AAGACAAGGC TGATATCTTC AAAATAAACT CATTTAAGCT ATCTAAACTC
GCAGAAAGCG AGCTGCAAAT ACCATTCTGG GCGTTAAATT TTGATGAGCT ATGCGAAATT
AGTTTTGGCG AGTTCAGCAA CGAGAAAGAA AAAAACGTTG TTATGGAGCG AGTTCATAAA
CTTAAAGCCG AGTCGATTGC TAAATATCCA AGAACTGGCG CGTCCCTTGA TTCGGTTAGT
GTTGACTCCC CTATTCCTTT TAGTATTCAC CATCTGTGGT ACGACCTTTT CATTGAGACA
TTTGCAACTT ACTACAAAGG CCGTCCAGGA AAACCGATGG ATAATCTTGC CTTTGAACTT
GACCCAGCTG GCAATGAGCT AAGAGGAAAT CCCGCTGCTG GGATACCTCC AATATTCAAG
AATATCGTTA CCGAGGCAAA CGAGGAGAAA ATCAACTATT TGCCAGGCTC ATTGAACATC
GGGAAAAATG TTTTGCTGCT CGGCACAAAA CTTCGAATAC CTAGGTATGA CTTTATATTT
CGTCCCGGCG ATTGGATGCC GGAAGCAGAC GGTTCAGTAG TGACTGATCT AGACAAATTG
CTTGAAAGCT GGATTGGCAG AAAGTCGATA TCTATCTTAG ATTTATCTGG CGTACCCCCA
GATATATTGC AAACCACAAT AGGGGCGGTA CTAAGGATAC TATATGAAGC TCTTTTTTGG
GCAAGAAATC TATCTCAGGG TGGCAGGCAT CGTCCGTTAT TAATTGTCAT GGAGGAAGCG
CATATATATC TCAATGACAG TTTCAAGGGC ATGGCTTCTA AAATTGTACA GCGGATAGTA
AAAGAGGGAC GAAAATACGG TATAGGCGCA ATGATCGTCA GCCAACGTCC GTCTGAAATA
GACCCTACAA TTCTCTCTCA GTGCGGTACT TTTTTTGCTC TTAGATTGAC TAATTCGACA
GATAGAGCGC ACATTACCTC TGCGCTTTCA GACAATCTGG ACGGGTTGAC TAGTATGCTG
CCCATCTTGA GGACAGGGGA GGCGATTATC TTAGGCGAAG CGGTAAAGCT TCCTATGAGG
ACCTCTATTC TAGCTCCGCC GAAAAATCGA CGACCAGATA GCCAAGATCC TATAGTTTAC
GATGAGTTCC CTTTCGATGA ATCTCTTTCT CCCGGTGGAT GGGGAATAAA AATGGAGGGC
AGTCCTAACT ATGAAGAACT AGTGGAAACA TGGCGAGCTC AGAACCCCCG TATTGATAAA
ATAAAACCTT AG
 
Protein sequence
MASKETYLGD VQDVNGTAVS ISLSKQSLTG FIYIDGQGYR VGQIGSFVRI PIGFSDLFGI 
VSQVGASAVP ENKNIIKDQS NRWMRIQLVG EGQRNGSFQR GLSQYPTIGD EVHLVSEKEL
KTIYGRPDRP YFVKLGHISN AESIPALIDI NKLVTRHSAI VGTTGSGKST TVASIMNALS
DTEKYPSSRI IMLDLHGEYG SALKDKADIF KINSFKLSKL AESELQIPFW ALNFDELCEI
SFGEFSNEKE KNVVMERVHK LKAESIAKYP RTGASLDSVS VDSPIPFSIH HLWYDLFIET
FATYYKGRPG KPMDNLAFEL DPAGNELRGN PAAGIPPIFK NIVTEANEEK INYLPGSLNI
GKNVLLLGTK LRIPRYDFIF RPGDWMPEAD GSVVTDLDKL LESWIGRKSI SILDLSGVPP
DILQTTIGAV LRILYEALFW ARNLSQGGRH RPLLIVMEEA HIYLNDSFKG MASKIVQRIV
KEGRKYGIGA MIVSQRPSEI DPTILSQCGT FFALRLTNST DRAHITSALS DNLDGLTSML
PILRTGEAII LGEAVKLPMR TSILAPPKNR RPDSQDPIVY DEFPFDESLS PGGWGIKMEG
SPNYEELVET WRAQNPRIDK IKP