Gene Psyr_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0096 
Symbol 
ID3365572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp106580 
End bp107563 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content56% 
IMG OID637650440 
Producttransposase IS4 
Protein accessionYP_233208 
Protein GI66043367 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC AGATGACCTT CGCCGACGCC GAATACGCCG GCAAGCGCAA GCGGACCCGT 
AAGGAATTGT TCCTGATCGA GATGGATCAG GTGGTGCCCT GGAAAGGTTT GATTGCCCTG
ATTGAGCCCT ATTATCCAAA AGGAGAAGGT GGCCGTCCCG CCTACCCACT GATGGCGATG
CTGCGTGTTC ATCTGATGCA GAACTGGTTC GGCTACAGCG ATCCGGCGAT GGAAGAAGCA
CTGTATGAGA CGACCATCCT GCGTCAGTTT TCAGGCCTGA GCCTGGAGCG CATTCCAGAC
GAAACCACCA TTCTCAACTT CCGTCGTCTG CTGGAAAAGC ACGAGTTGGC GACTGGAATT
CTCGGCGTAA TTAATGGTTA TCTGGGCGAC CGTGGCTTGT CGTTGCGTCA AGGCACCATC
GTCGATGCCA CGCTGATTCA CGCGCCCAGT TCGACCAAGA ACAAAGATGG CAAACGCGAC
CCTGAGATGC ATCAAACCAA GAAAGGTAAC CAGTACTATT TCGGCGCCAA GGCTCACATC
GGCGCCGACG ACGAGTCAGG CCTGGTGCAC AGCGTGGTAG TAACAGCGGC CAATGTGGCA
GACGTCACGC AGGTTGCCAA ACTGCTGCAC GGCGAGGAAA ACGTAGTCTG CGCCGACGCA
GGTTACACCG GGGTAGAGAA GCGCGAAGAA CATACTGGGC GCAAGGTCAT TTGGCAGATT
GCCGCCCGCC GTAGCACTTA CAAAAAACAC GGGAAACGCA ATGTTTTGTA CAAGGCGATC
CGCAAAATCG AGAAGGCCAA GGCCCAGGTT CGCGCCAAGG TCGAGCATCC GTTTCGGGTA
ATCAAACGCC AGTTTGGCTA TGAAAAAGTG CGCTTTCGGG GCTTGGCCAA GAACACCGCG
CAGATGGTGA CGTTGTTCGC CCTGTCAAAC CTGTGGATGG CCCGCCGACA TTTGTTGGCG
AGCGCAGGAG AGGTGCGCGT GTAA
 
Protein sequence
MMKQMTFADA EYAGKRKRTR KELFLIEMDQ VVPWKGLIAL IEPYYPKGEG GRPAYPLMAM 
LRVHLMQNWF GYSDPAMEEA LYETTILRQF SGLSLERIPD ETTILNFRRL LEKHELATGI
LGVINGYLGD RGLSLRQGTI VDATLIHAPS STKNKDGKRD PEMHQTKKGN QYYFGAKAHI
GADDESGLVH SVVVTAANVA DVTQVAKLLH GEENVVCADA GYTGVEKREE HTGRKVIWQI
AARRSTYKKH GKRNVLYKAI RKIEKAKAQV RAKVEHPFRV IKRQFGYEKV RFRGLAKNTA
QMVTLFALSN LWMARRHLLA SAGEVRV