Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0096 |
Symbol | |
ID | 3365572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 106580 |
End bp | 107563 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637650440 |
Product | transposase IS4 |
Protein accession | YP_233208 |
Protein GI | 66043367 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAC AGATGACCTT CGCCGACGCC GAATACGCCG GCAAGCGCAA GCGGACCCGT AAGGAATTGT TCCTGATCGA GATGGATCAG GTGGTGCCCT GGAAAGGTTT GATTGCCCTG ATTGAGCCCT ATTATCCAAA AGGAGAAGGT GGCCGTCCCG CCTACCCACT GATGGCGATG CTGCGTGTTC ATCTGATGCA GAACTGGTTC GGCTACAGCG ATCCGGCGAT GGAAGAAGCA CTGTATGAGA CGACCATCCT GCGTCAGTTT TCAGGCCTGA GCCTGGAGCG CATTCCAGAC GAAACCACCA TTCTCAACTT CCGTCGTCTG CTGGAAAAGC ACGAGTTGGC GACTGGAATT CTCGGCGTAA TTAATGGTTA TCTGGGCGAC CGTGGCTTGT CGTTGCGTCA AGGCACCATC GTCGATGCCA CGCTGATTCA CGCGCCCAGT TCGACCAAGA ACAAAGATGG CAAACGCGAC CCTGAGATGC ATCAAACCAA GAAAGGTAAC CAGTACTATT TCGGCGCCAA GGCTCACATC GGCGCCGACG ACGAGTCAGG CCTGGTGCAC AGCGTGGTAG TAACAGCGGC CAATGTGGCA GACGTCACGC AGGTTGCCAA ACTGCTGCAC GGCGAGGAAA ACGTAGTCTG CGCCGACGCA GGTTACACCG GGGTAGAGAA GCGCGAAGAA CATACTGGGC GCAAGGTCAT TTGGCAGATT GCCGCCCGCC GTAGCACTTA CAAAAAACAC GGGAAACGCA ATGTTTTGTA CAAGGCGATC CGCAAAATCG AGAAGGCCAA GGCCCAGGTT CGCGCCAAGG TCGAGCATCC GTTTCGGGTA ATCAAACGCC AGTTTGGCTA TGAAAAAGTG CGCTTTCGGG GCTTGGCCAA GAACACCGCG CAGATGGTGA CGTTGTTCGC CCTGTCAAAC CTGTGGATGG CCCGCCGACA TTTGTTGGCG AGCGCAGGAG AGGTGCGCGT GTAA
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Protein sequence | MMKQMTFADA EYAGKRKRTR KELFLIEMDQ VVPWKGLIAL IEPYYPKGEG GRPAYPLMAM LRVHLMQNWF GYSDPAMEEA LYETTILRQF SGLSLERIPD ETTILNFRRL LEKHELATGI LGVINGYLGD RGLSLRQGTI VDATLIHAPS STKNKDGKRD PEMHQTKKGN QYYFGAKAHI GADDESGLVH SVVVTAANVA DVTQVAKLLH GEENVVCADA GYTGVEKREE HTGRKVIWQI AARRSTYKKH GKRNVLYKAI RKIEKAKAQV RAKVEHPFRV IKRQFGYEKV RFRGLAKNTA QMVTLFALSN LWMARRHLLA SAGEVRV
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