| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0091 |
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| Symbol | gabD |
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| ID | 3365566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 99948 |
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| End bp | 101390 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637650434 |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_233203 |
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| Protein GI | 66043362 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTCA AAGATTCCAC ACTGTTCCGC CAGCAAGCCT ACATCAACGG CCAATGGCTG
GACGCGGACG GTGGTCAGTC GATCAAGGTC AACAACCCGG CCAACAATGA AATCCTCGGC
ACTGTGCCAA AAATGGGCGC AGCCGAGACG CGTCGGGCGA TTGAGGCGGC GGACAAGGCG
CTGCCGGCCT GGCGTGCGCT GACCGCCAAG GAGCGTGGCA ACAAGCTGCG CCGCTGGTTC
GAGCTGATGA TCGAGAACCA GGACGATCTG GGTCTGCTGA TGACGCTGGA GCAGGGCAAG
CCGCTGGCCG AAGCCAAGGG CGAGATCACC TATGCGGCTT CGTTCATCGA GTGGTTCGCC
GAAGAAGCCA AGCGCGTGTA TGGCGACGTG ATTCCTGGTC ACCAGCCGGA CAAGCGCCTG
ATCGTGCTCA AGCAGCCAAT TGGTGTGACG GCGGCGATCA CCCCGTGGAA CTTCCCGGCG
GCGATGATCA CGCGCAAGGC CGGTCCGGCA CTGGCGGCGG GTTGCACCAT GGTGCTCAAG
CCTGCGTCGC AAACGCCGTT CTCGGCACTG GCACTGGCTG AACTGGCCGA GCGTGCGGGT
ATCCCGGCGG GCGTGTTCAG CGTGGTGACC GGCAGCGCGG GCGATATCGG TGCCGAGCTG
ACCGGTAACC CGATCGTGCG CAAACTGTCC TTCACCGGCT CGACCGACAT TGGTCGCCAG
CTGATGGCCG AGTGCGCCAA GGACATCAAG AAGGTTTCCC TGGAGCTGGG CGGTAACGCG
CCTTTCATCG TGTTCGACGA TGCCGACCTC GACAAGGCGG TCGAAGGCGC GATGATCTCC
AAGTACCGCA ACAACGGCCA GACCTGCGTG TGCGCCAACC GCATCTACGT GCAGGACGCG
GTGTATGACG CGTTCGCCGA GAAGCTCAAG GCGGCGGTCG GCAAGCTGAA GATCGGTAAC
GGCCTGGAAG AAGGCGTCAC CACCGGCCCG TTGATCGACG ACAAGGCGGT GGCCAAGGTC
AAGGAGCACA TCGCCGACGC CGTCAGCAAG GGCGCAACCG TGCTGACCGG TGGCAACAGC
CTGGAAGGCT CGTTCTTCGA GCCGACCATT CTGGTCAACG TGTCTAAAGA TGCCGCCGTG
GCCCGGGAAG AAACCTTTGG CCCGCTGGCC CCGCTGTTCC GCTTCAAGGA CGAGGCCGAA
GTGATCGCGA TGGCCAACGA CACCGAGTTC GGTTTGGCGT CGTACTTCTA CGCGCAGAAC
ATGAGCCGCG TGTTCCGTGT CGCCGAAGCG CTGGAATATG GCATGGTGGG TATCAACACC
GGCCTGATCT CCAACGAACT GGCACCGTTC GGCGGTATCA AGTCGTCCGG CCTGGGCCGT
GAAGGCTCCA AGTACGGCAT CGAAGATTAT CTGGAAATCA AATACCTCTG CCTGTCGGTC
TGA
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| Protein sequence | MQLKDSTLFR QQAYINGQWL DADGGQSIKV NNPANNEILG TVPKMGAAET RRAIEAADKA
LPAWRALTAK ERGNKLRRWF ELMIENQDDL GLLMTLEQGK PLAEAKGEIT YAASFIEWFA
EEAKRVYGDV IPGHQPDKRL IVLKQPIGVT AAITPWNFPA AMITRKAGPA LAAGCTMVLK
PASQTPFSAL ALAELAERAG IPAGVFSVVT GSAGDIGAEL TGNPIVRKLS FTGSTDIGRQ
LMAECAKDIK KVSLELGGNA PFIVFDDADL DKAVEGAMIS KYRNNGQTCV CANRIYVQDA
VYDAFAEKLK AAVGKLKIGN GLEEGVTTGP LIDDKAVAKV KEHIADAVSK GATVLTGGNS
LEGSFFEPTI LVNVSKDAAV AREETFGPLA PLFRFKDEAE VIAMANDTEF GLASYFYAQN
MSRVFRVAEA LEYGMVGINT GLISNELAPF GGIKSSGLGR EGSKYGIEDY LEIKYLCLSV
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