Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0089 |
Symbol | |
ID | 3365564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 96943 |
End bp | 98331 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650432 |
Product | response regulator receiver |
Protein accession | YP_233201 |
Protein GI | 66043360 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.62061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCG CTGTAGTTTT GCCCGCCGTT CCTCGCGTAC TGATAGCCGA GTCTGATCCG TGGGTTCGCG AGACGCTTAG CGACCTGGTG CTGGGCGTGC GTGCGGATAT CGAGCTGGAG ATGTGCACCG ATGGCAAACA GGCCGTCGAG TGGATGAAAA AACACCTGCC GGACCTGATC ATCGCCGCCC GCGAACTGCC GGGGATCGAT GGCCTGAGCC TGCTGCGCGG CGTGCGCAAT CTGCGTCGTC AGCCCGCCAT CCCGTTCATT CTGATCAGTA ATCGCAATGA CAGCGCCAGC GTGCGCGAGG TCGTGCCGCT GGCACCGACT GCCTACCTGA CCAAACCGCT GAACACCGAA GGGCTGCGCC AGCGTCTTGA AGGCCTGCTG CTGGAACGCA GCGCCCCGGT TGCGGGTGCG GTGCCCGCGC TGACGCCGGG TCTGACCCTG ACCAAGTTTC TCGACAAACG CCGCGACATC GCCGATGGCG CGCCGCTGTT CGTCGATGTC GCCACGGCGG TGACGCTCAG CCAGACCGCC AGCGGCATCG ACGCCGCCCT GCTGGAGCAG GAACTGCGCA ACGATCCGCA CATCACCGCC GTACTGATCG CCGCCGCCAA CACGGCGGCG CAGCACCTGG GCAAGCCGAT TCAGACCATG GGCGGGGCGC TGGCCATTCT CGGGCCAGTG CAGGTCGCCA ATATCGCGTC CGGTCTGGGC AAAAAGCGTA TGGCGGTGCT GACCAACGAC GCGTTGCTGG CCAAGGCCCA TGAGCTGTGG ACCCTGTCGC AGCGCACGGC TGATTACGCG CGCATCCTGG GCGGCATGCT GGAGCTGGAT GCGGAGCGCT GTTTTAGCGC CGGACTGCTG CAGTCGCTGG GCGATCTGGC GGTATTGGGT TGTCTGCAGG AGTGGCTGCT GGCTGGCGGC CAACTGGATG AGCAGGTGAT CGGGCAGTCT CTGGAGCAGT ACTCCGCGGC CTTCGGTTCT GCTCTGCGCA CCCGCTGGCG TTTGCCGCTG GAACTGCGTG AGCTGATCGC TGCGGTGTAT CAGTACAATA CCGGCATCTA CACACGCGAA GTGCTGGCAA TGAACCTGGC GGGGCAGATG GCGCGCTTGG GCGAGGAAGA AAGTGTCACC ACGCTGATCA AGACCAAGTC GGCCAAGCTG TTGAAGCTCA GCGTCGGTGA CTTGCAGCGC CTGCGCAAGA AGCTGACAGG GGTGACGGAT CCGAGTTTGC TGAGGCCGCT GTCTAGCGAA ACTGAGGTGG CTGCCGAGGC GGTCGACGAC GAGCCTGATC TGCTCGACCT GGCACCTGAG GCACCTGCTG AAGCGCCTGC TGCGATCGAG GATCCGGCAG ACGCTGTTCA GGGTCCGCCC GAAAAGTAA
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Protein sequence | MMTAVVLPAV PRVLIAESDP WVRETLSDLV LGVRADIELE MCTDGKQAVE WMKKHLPDLI IAARELPGID GLSLLRGVRN LRRQPAIPFI LISNRNDSAS VREVVPLAPT AYLTKPLNTE GLRQRLEGLL LERSAPVAGA VPALTPGLTL TKFLDKRRDI ADGAPLFVDV ATAVTLSQTA SGIDAALLEQ ELRNDPHITA VLIAAANTAA QHLGKPIQTM GGALAILGPV QVANIASGLG KKRMAVLTND ALLAKAHELW TLSQRTADYA RILGGMLELD AERCFSAGLL QSLGDLAVLG CLQEWLLAGG QLDEQVIGQS LEQYSAAFGS ALRTRWRLPL ELRELIAAVY QYNTGIYTRE VLAMNLAGQM ARLGEEESVT TLIKTKSAKL LKLSVGDLQR LRKKLTGVTD PSLLRPLSSE TEVAAEAVDD EPDLLDLAPE APAEAPAAIE DPADAVQGPP EK
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