Gene Psyr_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0079 
Symbol 
ID3365554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp85222 
End bp86475 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content65% 
IMG OID637650422 
Producthypothetical protein 
Protein accessionYP_233191 
Protein GI66043350 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTT CGACAACAAC CTGTCAGATC CTGATCGTCG GTGCCGGTGC TGCCGGTATC 
GCCACTGCCG CAAGCCTGCT CGCCCGCGAC GCCACCCTGC AGATCACCCT GGTCGACCCC
GCCGATACCC ATTATTACCA GCCCGGCTGG ACCATGGTCG GTGCGGGGAT CTTCACGCCG
CAGTCGACGG CGCGCAGCAT GGCCTCGCTG ATTCCCGAAG GCGTGCAGTG GATCAAGGCT
GCGGTGGCGA CGTTCGAGCC GCAGCACAAC ACGCTGACGC TGGCTGACGG CCGCGTGCTC
GGCTATCAGC AACTGGTGGT CTGCCCCGGC CTGAAGCTGG ACTGGTCGGC TATCGACGGG
CTGGTCGACA CGCTCGGGGC CAATGGCGTG ACCTCCAACT ATCGCTATGA CCTGGCGCCC
TACACCTGGA AGCTGGTGCA GAACCTGCAA CAGGGGCGCG CGCTGTTTAC CCAGCCGCCC
ATGCCGATCA AGTGCGCCGG TGCGCCGCAG AAGGCCATGT ACCTGTCCTG CGATCACTGG
TTGAAAAGCG GCCGTCTCGC GCAGATCAAT ACGCAGTTCT ACAACGCCGG TGGCGTGCTG
TTCGGTGTCG CCGACTATGT GCCGGCGCTG ATGAAGTACG TCGAGCGCTA CGCCATCGAC
CTCAAGTTCA GCCATCGGCT GGTCGCCGTC GACGGGCCTG GCAAACGCGC GACCTTCATC
CGCACGCAAG CCGATGGCAG CAGCGAGACC GTCGAGCAAA GCTTCGAAAT GTTGCACGTA
GTGCCGCCGC AGATTGCCCC TGACTTCATC CGCAGCAGCC CGCTGGCCGA TGCTGCGGGC
TGGGTGGACG TCGACCCCGC CACGCTGAAG CACCGGCAGT TCGCCAATGT GCATGGCCTG
GGCGATGCCA CCAATACCAG CAACGCCAAG ACCGCCGCAG CGGCACGCAA GCAGGCGCCG
GTGGTGGCCA ACAACGTATT GGTCGCGCTG GGTCGTCGGA GTGAGTCCGC GGTGTATGAC
GGTTACGGCT CGTGCCCGCT GACGGTCGAG AAAGGCCGCA TCGTGCTGGC CGAATTCACC
TATGGCGGCA AGGTCGCGCC GAGCTTTCCG CGCTGGCTGC TGGACGGTCG CCAGCCAACC
CGACTGGCCT GGTGGCTGAA AGCGCGAGTG CTGCCCGCGC TGTACTGGCA TGGCATGCTC
AAAGGCCGTG AGTGGCTGGC CAAACCGCAA AAGGCTGACA CCCGGCATGG ATGA
 
Protein sequence
MNASTTTCQI LIVGAGAAGI ATAASLLARD ATLQITLVDP ADTHYYQPGW TMVGAGIFTP 
QSTARSMASL IPEGVQWIKA AVATFEPQHN TLTLADGRVL GYQQLVVCPG LKLDWSAIDG
LVDTLGANGV TSNYRYDLAP YTWKLVQNLQ QGRALFTQPP MPIKCAGAPQ KAMYLSCDHW
LKSGRLAQIN TQFYNAGGVL FGVADYVPAL MKYVERYAID LKFSHRLVAV DGPGKRATFI
RTQADGSSET VEQSFEMLHV VPPQIAPDFI RSSPLADAAG WVDVDPATLK HRQFANVHGL
GDATNTSNAK TAAAARKQAP VVANNVLVAL GRRSESAVYD GYGSCPLTVE KGRIVLAEFT
YGGKVAPSFP RWLLDGRQPT RLAWWLKARV LPALYWHGML KGREWLAKPQ KADTRHG