| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0062 |
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| Symbol | hemC |
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| ID | 3365537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 61471 |
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| End bp | 62412 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637650405 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_233174 |
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| Protein GI | 66043333 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC GCGAAATCCG CATCGCCACT CGCAAAAGCG CGTTGGCACT CTGGCAGGCA
GAATACGTCA AGGCCCGCCT GGAACAGGCC CACCCCGGCC TGCTCGTGAC GTTGGTGCCC
ATGGTCAGCC GTGGCGACAA ACTGCTCGAC TCCCCGCTGT CGAAAATCGG TGGCAAAGGG
CTGTTCGTCA AGGAGCTGGA AACCGCGCTT CTGGAAAACA ACGCCGACAT CGCCGTGCAT
TCGATGAAAG ACGTGCCGAT GGATTTTCCA CAAGGCCTGG GCCTGTTCTG CATCTGCGAG
CGTGAAGACC CGCGCGATGC ATTCGTCTCC AACACCTTTG CCAGCCTGGA CCAGTTACCG
GCGGGCAGCA TTGTCGGCAC CTCCAGCCTG CGCCGTCAGG CCCAATTGCT GGCGCGTCGA
CCCGACCTGC AGATCCGTTT CCTGCGCGGC AACGTCAATA CCCGTCTGGC CAAGCTCGAT
GCCGGTGAGT ACGACGCCAT CATCCTCGCC GCCGCCGGCC TGATCCGCCT GGGTTTCGAA
GACCGCATCA CCTCGGCAAT CAGCGTCGAT GACAGCCTGC CAGCCGGTGG CCAGGGCGCG
GTGGGTATCG AATGCCGCAG CGTCGACGCC GAAATTCATG CGCTGCTTGC CCCTCTGCAC
CACGAAGACA CCGCCGTGCG CGTGATTGCC GAACGTTCGC TGAACAAGCA CCTCAACGGT
GGCTGCCAGG TGCCGATTGC CTGCTACGCC GTGCTGGAAG GCGATGACGT CTGGTTGCGC
GGCCTGGTGG GTGATCCGTC CGGCAGCGTG TTGCTGCATG CAGATGCCCG GGCGCCCCAG
ACCTCCGCCC AGGCGTTGGG TGTGCAGGTG GCCGAAGCGC TGCTGGAGCA GGGCGCCGCC
GACATCCTGA AAGCGGTCTA CGGCGAGGCC AATAACGAAT GA
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| Protein sequence | MSSREIRIAT RKSALALWQA EYVKARLEQA HPGLLVTLVP MVSRGDKLLD SPLSKIGGKG
LFVKELETAL LENNADIAVH SMKDVPMDFP QGLGLFCICE REDPRDAFVS NTFASLDQLP
AGSIVGTSSL RRQAQLLARR PDLQIRFLRG NVNTRLAKLD AGEYDAIILA AAGLIRLGFE
DRITSAISVD DSLPAGGQGA VGIECRSVDA EIHALLAPLH HEDTAVRVIA ERSLNKHLNG
GCQVPIACYA VLEGDDVWLR GLVGDPSGSV LLHADARAPQ TSAQALGVQV AEALLEQGAA
DILKAVYGEA NNE
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