| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0049 |
|---|
| Symbol | |
|---|
| ID | 3365524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 49110 |
|---|
| End bp | 51008 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637650392 |
|---|
| Product | cytochrome c, class I:Iron permease FTR1 |
|---|
| Protein accession | YP_233161 |
|---|
| Protein GI | 66043320 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
|---|
| TIGRFAM ID | [TIGR00145] FTR1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTCC ATTCTCGTTT TCTTGCCTGG TTACTGTTGC CGCTCCTGGC GCTGGGCAGC
TGCGTTGCGC TGGCCGACCC GGTCGAGGGT GCAGCCCAGG CGCTGCATCT GCTGGATTAC
CTGGGGGCCG ATTACCCGGC GACCGTGGCA GACGGCAAGG TCGTGGACAC CGTCAAGTAC
CAGCAACAGG TCGATAACCT GGCTGCGTTG CAGGGCCTGG TCGTTGCCTT GCCGCAGCGC
GCCGGGCGGG ATGCTCTGGA GCAGGCGGTC ACCCAGCTGA AAAGCGCTGT GGCGGGTCGA
CAGGACGCTG CGCAGGTCAC GCGTCAGGCG CGGCAGTTGA GTGCCAGGCT CGCGCTTGCC
TACGAGGTCA GTCAGGCCCC GGCCATTACG CCGGACCCCG CCCGTGGCGC GCCTTTGTAC
GCCCAGCATT GCTCGGTGTG CCATGGCGAC AGCGGTGCAG GGGATGGACC GGCAGGTATC
GGCCTGGAAC CGCCGCCCTC GAACCTGCGG GATACCGCGC GGCTGGATCG CCTGAGTCTC
TACGATCTCT ACAACGCGAC CGGGCTGGGT ATTGCCGGCA CCGATATGCC CGCGTTCGCC
GACCAGCTGG ATGATCGCCA GCGCTGGGAT GTAGCGACCT ATATCGCCAG CTTCAGCGCG
CAACCTGTCG CCCAGCCTGC CAAGACCTTC AACCTTGCCG ACCTGGCTCG CCAGACACCG
GCCGAAATCC AGGCAGCCGA AGGTCCGGAC GCTACCGCCA CCTTCCGGGC CCAGCGCGCG
CAGCCACCAC AAGTACAGCG CGGCCCGGCG CAACTGCTGG ATTACACCAG TGTAACGCTG
GACAAGAGCC TGGCGGCCTA CAAGGCCGGT GATCGCGAGC AGGCCTATGA TTTGTCCGTG
GCAGCGTATC TGGAGGGTTT CGAGCTGGTC GAAAGCTCGC TGGATAACGT CGACGCCAAT
GTGCGCAAGG ACACTGAAAA GAGCCTGATG GCTTACCGGC AGTCCTTGCA GGACAGCATG
CCGCTACCTC AGGTTGCGCA GAAGCTGGAA GCGGCCAAAG GCAAGCTCAA GGAGTCGGCG
GACCTGTTGG GCAGCGACGG CCTGAGCCTG TCACTGAGCT ACATCTCGGG CCTGTTGATC
CTGCTGCGTG AAGGGCTGGA AGCGATTCTG GTACTGGCGG CGATTCTGGC GTTTCTGCGC
AACACCGGCC AGCAGTCTGC CGTACGCAGC GTCAACATCG GCTGGGGTCT GGCGCTGCTG
GCCGGGCTGG CCACCTGGGC GCTCGCGGCG TATGTCATCG ACGTCAGCGG CGCACAACGG
GAATTGCTGG AAGGCGCCAC CGCGTTGTTC GCCAGTGTGA TGGTGCTCTG GCTCGGGGTG
TGGATGCATG ACCGTCGCCA CGCCGCTGCG TGGCAGGACT ACGTCAAAAG CAGTCTGGTC
GGCGGCGGCG GTCGTTTCGG CTTCGCGGTG CTGGCGTTCT TCTCGGTCTA CCGCGAGCTG
TTCGAAGTCA TCCTGTTCTA CGAAACCCTG TGGCTGCAGG CAGGACCGGC CGGACACGAT
GCCGTGCTGG CGGGCGGTGC CACGGCGCTG GTGCTGCTCG TGGGCCTGGC GTGGATCATC
CTGCGCGGCT CGGCGAAGCT GCCGCTGTCG CTGTTCTTCG GCATCAACGC TGCGCTGCTC
TGCGCACTGT CGGTGGTGTT TGCCGGTCAC GGCGTCAAGG CGCTGCAAGA GGCGGGCATA
TTCGGCACAA GGCCGGTGCC GTTCTTCGAG TTCGACTGGC TGGGCATTCA CGCCGACCTG
TACTCGCTCG GCGCGCAGGC CATCGCCCTG ATCGCCATTG CCGTGCTGTA CGGCAGAAGT
CGTCTGGCCG AGAAGCGCAG GCTGCAGACG GCAGACTGA
|
|---|
| Protein sequence | MPVHSRFLAW LLLPLLALGS CVALADPVEG AAQALHLLDY LGADYPATVA DGKVVDTVKY
QQQVDNLAAL QGLVVALPQR AGRDALEQAV TQLKSAVAGR QDAAQVTRQA RQLSARLALA
YEVSQAPAIT PDPARGAPLY AQHCSVCHGD SGAGDGPAGI GLEPPPSNLR DTARLDRLSL
YDLYNATGLG IAGTDMPAFA DQLDDRQRWD VATYIASFSA QPVAQPAKTF NLADLARQTP
AEIQAAEGPD ATATFRAQRA QPPQVQRGPA QLLDYTSVTL DKSLAAYKAG DREQAYDLSV
AAYLEGFELV ESSLDNVDAN VRKDTEKSLM AYRQSLQDSM PLPQVAQKLE AAKGKLKESA
DLLGSDGLSL SLSYISGLLI LLREGLEAIL VLAAILAFLR NTGQQSAVRS VNIGWGLALL
AGLATWALAA YVIDVSGAQR ELLEGATALF ASVMVLWLGV WMHDRRHAAA WQDYVKSSLV
GGGGRFGFAV LAFFSVYREL FEVILFYETL WLQAGPAGHD AVLAGGATAL VLLVGLAWII
LRGSAKLPLS LFFGINAALL CALSVVFAGH GVKALQEAGI FGTRPVPFFE FDWLGIHADL
YSLGAQAIAL IAIAVLYGRS RLAEKRRLQT AD
|
|---|
| |