Gene Psyr_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0043 
Symbol 
ID3365518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp44004 
End bp45059 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID637650386 
Producthypothetical protein 
Protein accessionYP_233155 
Protein GI66043314 
COG category[R] General function prediction only 
COG ID[COG4324] Predicted aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAT TCGCCCTGCC ACGCCTTCGC CACCTGCTAG CGCTGACGGC CGTCACGCTG 
CTGACCGGCT GCTCCAGCGT TTCCTACTAC AGCCAGTTGG CGCAGGGTCA GTGGCAGTTG
CTGCAGGCCC GTGAGCCGGT GGAGAAGATC ATTGCTGACC CGACTCGGGA TGCAGGTTTG
CGCAGGCATC TGGCCCAGTC ACAGTTGGCG CGGGCGTTTG CCAGTGAGCA TTTGCATCTG
CCGGACAACA AGAGTTACCG CCTGTATGCC GATCTGGGCC GCCCTTATGT GGTGTGGAAT
GTGTTCGCGA CGGATGAGTT CTCGCTGGAG CCGGTCACGC ATTGTTTTCC GATTGCCGGG
TGTGTCGCGT ATCGCGGTTA TTACAGCCCT GGCGGGGCGC GTGGCGAGGC GGCGTTGCAG
CGGCAGGCGG GCAAGGATGT GTATTTGAGT GGCGTGGAAG CCTATTCGAC GCTGGGTTGG
TTCAATGATC CGATTCTCAG TTCGATGATG GGCTGGGGTG ACGAGCGTCT GGCCACGCTG
ATTTTTCATG AATTGGCGCA TCAGCGTTTT TATGTGAAGG ACGACACGGA GTTCAACGAG
TCCTACGCCA GTTTCGTCGA GCAGGAAGGT ACGCGGCAAT GGCGTGCGGC GCGGGGATTG
CCGCCGGAGA GTGTTTCGCA GTCGGCACGG CGTGATCAGT TTACCCGGCT GGTGCTCGAC
ACCCGGGAGC GACTCAAGGC GCTTTATCGT CAGCCGCTGT CGGCCGAAGT GATGCGCGCG
CGCAAGGCTG AGGAATTCGA GCGGATGCGC CGTGACTACC GCGCGTTGCG GGATGAGCAG
TGGGCTGGCG ACAAGCGTTT CGATGCCTGG ATCAACAGCC CGATGAACAA CGCTAAACTG
CTGCCTTTTG GTCTTTACGA TCAATGGGTG CCAGCGTTCG AGACGTTGTT CAGGCAGGAG
AATGGCGACT GGCAGGCTTT TTATCGAGCG GTGGAGAAGC TGGGCGGGAT GCCTGCCGAG
GCGCGCAAGG CGGCGCTGCA GGCGTTGATG CCTTGA
 
Protein sequence
MATFALPRLR HLLALTAVTL LTGCSSVSYY SQLAQGQWQL LQAREPVEKI IADPTRDAGL 
RRHLAQSQLA RAFASEHLHL PDNKSYRLYA DLGRPYVVWN VFATDEFSLE PVTHCFPIAG
CVAYRGYYSP GGARGEAALQ RQAGKDVYLS GVEAYSTLGW FNDPILSSMM GWGDERLATL
IFHELAHQRF YVKDDTEFNE SYASFVEQEG TRQWRAARGL PPESVSQSAR RDQFTRLVLD
TRERLKALYR QPLSAEVMRA RKAEEFERMR RDYRALRDEQ WAGDKRFDAW INSPMNNAKL
LPFGLYDQWV PAFETLFRQE NGDWQAFYRA VEKLGGMPAE ARKAALQALM P