| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0024 |
|---|
| Symbol | |
|---|
| ID | 3365499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 27721 |
|---|
| End bp | 28635 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650367 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_233136 |
|---|
| Protein GI | 66043295 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCC GTACCGAGGC CGTAAAAGCC TACCTGCTCG ACCTGCAAGA CCGTATCTGC
ACTGCGCTTG AACAGGAAGA TGGCAGCGCA CACTTCATGG AAGATGCCTG GACGCGTCCG
GCGGGCGGCG GTGGTCGCAC GCGGGTGATC GAGAATGGCA CGGTCATCGA GAAAGGCGGT
GTCAATTTTT CCCATGTTTT CGGCAGCAAT CTGCCGCCGT CTGCCAGCGC TCATCGGCCT
GAACTGGCCG GGCGTGGTTT CGAGGCGCTG GGCGTTTCGC TGGTGATCCA TCCGCACAAC
CCGCATGTGC CGACGTCCCA CGCCAACGTG CGCTTCTTCA TTGCCGAGAA AGAAGGTGAA
GAGGCCGTCT GGTGGTTCGG TGGCGGTTTC GACCTGACGC CCTATTACGG CGTCGAGGAA
GACTGCGTGC ACTGGCACCG GGTTGCCGAG CGCGCCTGTG CGCCCTTCGG TGAGGATGTC
TACCCGCGCT ACAAGGCCTG GTGCGACAGT TACTTCCACC TCAAGCATCG CGATGAACCG
CGCGGCATCG GTGGTCTGTT TTTCGATGAC GTGAACCAGT GGGATTTCGA CACCAGCTTC
GCCTTCATCC GCGCCATCGG TGATGCGTTC ATCAATGCCT ATCTGCCGAT CGTGCGGCGG
CGCAAGGCGG CGGCCTATAC CGTGCAGCAG CGTGAGTTTC AGGAATTCCG TCGTGGTCGC
TACGTCGAGT TCAACCTGGT GTATGACCGC GGCACGTTGT TCGGTCTGCA ATCGGGTGGG
CGTACCGAAT CGATCCTCAT GTCGCTGCCG CCGCAAGTGC GCTGGGGTTA TGACTGGAAG
GCCGCGCCGG GCAGCGAAGA AGCGCGTCTG ACCGAATACT TCCTGACCGA CCGCGACTGG
CTGGCGGAAA ACTGA
|
|---|
| Protein sequence | MSTRTEAVKA YLLDLQDRIC TALEQEDGSA HFMEDAWTRP AGGGGRTRVI ENGTVIEKGG
VNFSHVFGSN LPPSASAHRP ELAGRGFEAL GVSLVIHPHN PHVPTSHANV RFFIAEKEGE
EAVWWFGGGF DLTPYYGVEE DCVHWHRVAE RACAPFGEDV YPRYKAWCDS YFHLKHRDEP
RGIGGLFFDD VNQWDFDTSF AFIRAIGDAF INAYLPIVRR RKAAAYTVQQ REFQEFRRGR
YVEFNLVYDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK AAPGSEEARL TEYFLTDRDW
LAEN
|
|---|
| |