| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0020 |
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| Symbol | |
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| ID | 3365495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 23672 |
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| End bp | 24697 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637650363 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_233132 |
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| Protein GI | 66043291 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAT CACTACTCGC CCTGCTGCTG CTGACCGCCA GCGGTCTTGC GCAGGCGCAA
GTGCAACTCA GGGAAGGCTA TCCACAGAGC TACACCGTTG TCGCCGGGGA CACACTCTGG
GACATTTCCG GCAAGTTCTT GCGTGAACCG TGGAAATGGC GCGAGATCTG GCGGGCCAAT
CCGCAAGTCC ATGATCCTGA CCTGATCTAC CCCGGTGACA CCCTCGCGCT AACCTGGGTC
AATGGTCAGC CGCGCGTGAC GCTCAATCGC GGCCAGTCGC GTGGCACCAT CAAATTGTCA
CCGCGGGTGC GCAGTACGCC GATGGTCGAG GCCATTCCGA GCATTCCGCT GGGCGCGATC
AACGCTTTCC TGATCAACAA TCGGATTGTC GACAGCGCCG AGCAGTTCGA AAAAGCCCCC
TACATCGTTG CGGGCAATGC CGAGCGCGTG CTCAGTGGCA ACGGTGATCG CGCCTATGCA
CGGGGCGCGC TGGACCCGGC GCACAGCGTC TATGGCATCT TCCGTCAGGG CAAGACCTAC
GTCGACCCCA AGACCCAGGA AGTGCTGGGG ATCAATGCCG ATGACGTCGG CAGCGCCGAG
GTGGTTGCCA CCGAGGGTGA CGTCTCGACC CTGATTCTGC AGCGCTCCAC ACAGGAAGTG
CGTCTGGGCG ATCGTTTATT CAGCAGCGAA GAGCGGGCTA TAAACTCGAC GTTCCTGCCC
AGCGCCCCGC AGGCGCCGAT AGACGGTTTG ATTCTGGATG TGCCACGCGG CGTCACCCAG
GTCAGCGTGC TGGATGTGGT CACGCTCGAC AAGGGCAAAC GCGACGGCCT GACCGAGGGC
AACGTGCTGG CGATCTACAA GACCAGCGAG ACCGTGCGCG ACCGGATCAC CGGTGAACAG
GTAAAGATCC CCGACGAACG GGCCGGCCTG CTGATGGTTT TCCGTACCTA CGACAAGCTT
AGTTACGCCT TGGTCCTGCA AGCCAACCGA TCTTTGGCCA TCATGGACAA GGTTCGCAAC
CCGTAG
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| Protein sequence | MRKSLLALLL LTASGLAQAQ VQLREGYPQS YTVVAGDTLW DISGKFLREP WKWREIWRAN
PQVHDPDLIY PGDTLALTWV NGQPRVTLNR GQSRGTIKLS PRVRSTPMVE AIPSIPLGAI
NAFLINNRIV DSAEQFEKAP YIVAGNAERV LSGNGDRAYA RGALDPAHSV YGIFRQGKTY
VDPKTQEVLG INADDVGSAE VVATEGDVST LILQRSTQEV RLGDRLFSSE ERAINSTFLP
SAPQAPIDGL ILDVPRGVTQ VSVLDVVTLD KGKRDGLTEG NVLAIYKTSE TVRDRITGEQ
VKIPDERAGL LMVFRTYDKL SYALVLQANR SLAIMDKVRN P
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