| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0019 |
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| Symbol | def |
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| ID | 3365494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 23040 |
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| End bp | 23546 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637650362 |
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| Product | peptide deformylase |
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| Protein accession | YP_233131 |
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| Protein GI | 66043290 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATTC TAAACATCCT CGAATTTCCC GATTCGCGCC TGCGCACCAT CGCCAAACCT
GTGGCGATGG TAGACGACGG CATTCGCCAG TTGGTCGACG ACATGTTTGA AACCATGTAC
GAAGCGCCAG GTATTGGCCT GGCCGCGACT CAGGTCAACG TCCACAAGCG CGTGGTCGTC
ATGGACCTGA GCGAAGACCG TAGCGAACCG ATGGTCTTCA TCAATCCTGA AATCGAAAAA
CTGACCGATG AAATGGATCA GTATCAGGAA GGCTGCCTGT CGGTGCCGGG CTTCTACGAG
AACGTCGACC GTCCGCAAAA GGTCCGCGTC AAGGCGCTGG ACCGTGACGG CAAGCCTTAT
GAACTGGTTG CCGAGGGCCT GCTCGCCATC TGTATCCAGC ATGAATGCGA TCACCTGAAC
GGCAAGCTGT TCGTCGATTA CCTGTCCAAC CTCAAGCGTG ACCGGATCAA GAAGAAGCTC
GAAAAGCAGC ACAAGCTCAA CGCCTGA
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| Protein sequence | MAILNILEFP DSRLRTIAKP VAMVDDGIRQ LVDDMFETMY EAPGIGLAAT QVNVHKRVVV
MDLSEDRSEP MVFINPEIEK LTDEMDQYQE GCLSVPGFYE NVDRPQKVRV KALDRDGKPY
ELVAEGLLAI CIQHECDHLN GKLFVDYLSN LKRDRIKKKL EKQHKLNA
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