Gene Psyr_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0018 
Symbolfmt 
ID3365493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp22042 
End bp22986 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID637650361 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_233130 
Protein GI66043289 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC CACTGCGCAT CGTCTTCGCC GGCACCCCGG AATTCGCCGC CGAACACCTC 
AAGGCCCTGC TCGACAGCCC TCACCAGATC GTCGCCGTGT ACACCCAGCC CGATCGCCCG
GCCGGTCGTG GACAAAAGCT GATGCCCAGC CCGGTCAAGC AACTGGCGCT GCAACATGAC
GTACCGGTCA TGCAGCCGCC CACACTGCGC GATCCTGCTG CGCAGGCTGA ACTGGCAGCG
CTGCAACCCG ATTTGATGGT GGTCGTCGCC TACGGCCTGA TCCTGCCGCA AGTGGTGCTG
GATATTCCGC GCCTGGGCTG CATCAACAGC CATGCGTCGC TGCTGCCGCG CTGGCGCGGT
GCGGCGCCGA TTCAGCGCGC GGTGCAGGCC GGTGATGCCG AGAGCGGCGT AACCGTGATG
CGCATGGAAG CGGGCCTGGA CACCGGGCCG ATGCTGCTCA AGGCGGTCAC CCCGATTACC
GCGCAGGACA CGGGCGGCAC GCTGCATGAT CGCCTGGCCG AACTCGGTCC GCCTGCTGTG
TTGCAGGCTA TTGCCGGTCT GGCGGACGGT ACGCTGGTCG GCGAGGTTCA GGATGACAGC
CTGGCCAACT ACGCCCATAA GCTGAACAAG GACGAAGCAC GCCTGGACTG GACGCGTCCG
GCCGATGAGC TTGAACGCCT GGTCCGCGCC TTCAACCCCT GGCCGATCTG TCACAGCACG
CTGAACGAAG AAACCCTGAA AGTCCTGGCC GCCGATCTGG CCGAAGGGCA GGGCGCGCCG
GGGACGATTC TTGGCGCCAG CAAGGATGGC CTGATCGTCG CCTGCGGGCA GAACGCGCTG
CGCCTGACCC GTCTGCAATT GCCGGGCGGC AAGCCGCTGA ACTTCACTGA CCTGTTCAAC
AGCCGCCGCG AGAAATTTGC CATCGGCACG GTGCTGGGCC AATGA
 
Protein sequence
MTEPLRIVFA GTPEFAAEHL KALLDSPHQI VAVYTQPDRP AGRGQKLMPS PVKQLALQHD 
VPVMQPPTLR DPAAQAELAA LQPDLMVVVA YGLILPQVVL DIPRLGCINS HASLLPRWRG
AAPIQRAVQA GDAESGVTVM RMEAGLDTGP MLLKAVTPIT AQDTGGTLHD RLAELGPPAV
LQAIAGLADG TLVGEVQDDS LANYAHKLNK DEARLDWTRP ADELERLVRA FNPWPICHST
LNEETLKVLA ADLAEGQGAP GTILGASKDG LIVACGQNAL RLTRLQLPGG KPLNFTDLFN
SRREKFAIGT VLGQ