| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0005 |
|---|
| Symbol | |
|---|
| ID | 3365480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 6282 |
|---|
| End bp | 7169 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637650348 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233117 |
|---|
| Protein GI | 66043276 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.489422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAC TCAATCTGGT TGCCCGTTCA GTGCTGGCCA GCTCTACCAT GCTGTGTTGG
TCGACCGTGA CTCATGCCCT GGAAATCACC GCAGGCGATT ATGAGCCGCT GCCTGTCGGC
ATGAACGCTT TGCTGGTTTA TGCACAACAC GCTGAAAGCT CGGACTTTTA CAGCAACGGT
CAAAAAGTCT CGGACGATTT TCGGCTCAAG ACCGATGTCA GCCTGCTTCG CTATATCCAC
TCGTTTGCGC TGAGCAACAA CGCGGTGATA GAGCCACAGT TCATCCTGCC TTATGGACAT
CTGAAGGCTG GTGGTGAGGC AAGCGCGCTT GGCCAGACCA CCGGCGCCGG AGATCTGATT
CTCGGCGCAC CGGTAAAGTG GACCTTAGCC ACTGCAAATA AGGATGTCTT TTCCGTGGCG
CCTTACCTTT ATTTGCCTAC CGGCAGTTAC GAAAACGACG ACACACTCAA CCTGGGTGAA
AACCGCTGGC GTCTTTTGCT GCAAGCAGCC TACATCCATC ACTTCAATGC CAGATGGGCT
CTGGACACCG CTGCGGATGT CTCATGGTTC AGCGATAACG ATGATTACGG TTCAGGCAGT
GACACATTGG CACAGAAGAC CCGCTACGAA TATCAGGCTT ACCTGAGCTA CAACGTTTCA
CCGCAAACCC GGTTTGCCGT TGGTGGAGGC CATATTGATG GCGGAGAAAA CCGGGTGGGT
GGCGTCAATC AAGACGATCA ACTGAGCACT ACCTACCTGC GTGTGAGTGC CACTCACATG
CTGACCCCGT CGATTCAGGT CCAGGCCGTA CTCGGCAGGG ATGTAGAAGT GGAGGAGGGC
TTCCGGGAAA AGTCCCGCTT GAATCTGCGA CTGGCGAAAC TGTTTTAG
|
|---|
| Protein sequence | MQRLNLVARS VLASSTMLCW STVTHALEIT AGDYEPLPVG MNALLVYAQH AESSDFYSNG
QKVSDDFRLK TDVSLLRYIH SFALSNNAVI EPQFILPYGH LKAGGEASAL GQTTGAGDLI
LGAPVKWTLA TANKDVFSVA PYLYLPTGSY ENDDTLNLGE NRWRLLLQAA YIHHFNARWA
LDTAADVSWF SDNDDYGSGS DTLAQKTRYE YQAYLSYNVS PQTRFAVGGG HIDGGENRVG
GVNQDDQLST TYLRVSATHM LTPSIQVQAV LGRDVEVEEG FREKSRLNLR LAKLF
|
|---|
| |