Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0002 |
Symbol | |
ID | 3365477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1575 |
End bp | 2678 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650345 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_233114 |
Protein GI | 66043273 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTCA CCATTCAACG CGAAGCCCTG TTGAAACCCC TGCAATTGGT CGCCGGCGTC GTCGAACGCC GCCAGACCTT GCCGGTTCTT TCCAATGTGC TCCTGGTCGT CGAAGGTCAG CAACTGTCGC TGACCGGTAC GGATCTGGAA GTCGAACTGG TTGGCCGCGT CCAGCTGGAA GAGCCCGCCG AACCTGGAGA AATCACGGTT CCTGCGCGCA AGCTCATGGA CATTTGCAAA AGCCTGTCCA ATGACGCGCT GATCGACATC AAGCTCGATG ACTCGAAACT GATCGTCAAG GCCGGTCGTA GCCGGTTCAC CCTGTCGACT CTGCCTGCCA ATGATTTCCC TACCGTTGAA GAAGGCCCGG GTTCGCTGAC GTTCACTCTG GTGCAGAGCA AACTGCGCCG CTTGATCGAG CGCACCAGCT TTGCGATGGC CCAGCAGGAC GTTCGGTACT ACCTCAACGG CATGCTGCTT GAAGTGAGTG CCGGTATCTT GCGTGCGGTT GCCACCGACG GCCACCGCCT GGCCATGTGC TCGATGTCTG CCGATATCGA ACACGCCGAT CGCCATCAGG TGATCGTTCC ACGCAAAGGT ATTCTTGAAA TGGCGCGCCT GCTGACCGAA CAGGACGGCA CGGTCAGTAT CGTTCTGGGT CAGCATCACA TCCGTGCGAC GACTGGCGAA TTCACCTTCA CCTCCAAACT GGTCGATGGC AAGTTCCCGG ATTACGAGCG TGTGCTGCCC AAAGGTGGTG ACAAGCTGGT GCTCGGTGAT CGTCAGGCAC TGCGTGAGGC GTTCAGCCGC ACGGCGATTC TGTCCAACGA GAAGTACCGC GGCATCCGTC TGCAACTGGC CAGCGGTCAA TTGAAGATTC AGGCCAACAA CCCTGAGCAG GAAGAAGCAG AAGAGGAAAT CAGCGTCGAG TACAACGGTG ACTCGTTGGA GATTGGTTTC AACGTGAGCT ACTTGCTCGA CGTGCTGGGC GTCATGACCA CCGAACAGGT GCGCCTGATT CTGTCCGACT CCAATAGCAG CGCCCTGGTG CAAGAGTCCG ATAACGACGA CTCCGCCTAC GTTGTCATGC CGATGCGTCT GTAA
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Protein sequence | MHFTIQREAL LKPLQLVAGV VERRQTLPVL SNVLLVVEGQ QLSLTGTDLE VELVGRVQLE EPAEPGEITV PARKLMDICK SLSNDALIDI KLDDSKLIVK AGRSRFTLST LPANDFPTVE EGPGSLTFTL VQSKLRRLIE RTSFAMAQQD VRYYLNGMLL EVSAGILRAV ATDGHRLAMC SMSADIEHAD RHQVIVPRKG ILEMARLLTE QDGTVSIVLG QHHIRATTGE FTFTSKLVDG KFPDYERVLP KGGDKLVLGD RQALREAFSR TAILSNEKYR GIRLQLASGQ LKIQANNPEQ EEAEEEISVE YNGDSLEIGF NVSYLLDVLG VMTTEQVRLI LSDSNSSALV QESDNDDSAY VVMPMRL
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