| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI04280 |
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| Symbol | |
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| ID | 3259457 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | - |
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| Start bp | 1134993 |
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| End bp | 1139884 |
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| Gene Length | 4892 bp |
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| Protein Length | 1296 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638258923 |
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| Product | Rho guanyl-nucleotide exchange factor, putative |
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| Protein accession | XP_572596 |
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| Protein GI | 58270880 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.666845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGGT TGCCTTCTGG GCCTACTCAA GCTTTCCCAG CTGGTGCGAT GACGCCTGCC
CAGGCGTACC AGGCCTCCCA GGGGTACCCG ACATCCAGTG TCGCCTTCCC TAGACCTTCG
ACTGCTTCTC CTGCTATTCC AACGCAAGCT ACGCAGAATA TCGGGACACC ATTCGATCCC
TCGTCCTCTG TTACTTCTTT TTCTACTACC AACTCGGCAA CCTCTCGAAT CCCCACGAGT
ACATCTATCA CTTCGTTTCA CAAACCGACT TCGCAGTCAC CGTCGTTGGC AGAAACGTCG
AAAGAAAGGT CAGCAACGCC GGATTATATT GGGAAAATGG GCCAATTGGC GTTTGAAAGT
AATCCCGGGG AAAATTGGAT GGAGGATGTG ACAGGTATCA GTGTCAGTCC TGATGATGGT
GAGTGGCTTA AGTTTGTCAT ATGATACGCT CTGACCGAAA TTGACAGGCC GTAATCCTGT
TCTTCCACCA AAATCTCTGC ATGGCCATGG GACGTTGTCA GACATAGGGC GGGCGTCAAT
GCACAAGCGC ATGGCTTCGG ATTCATCCAT TTTAAGCGGC GATAATGCCA CAAAGGCGGG
CCTTGCGTGA GTTGCTTCAT ATTTGGTCCC GTCCTTGCTG ACTTGGGTAG ATCGCGCTCG
CCGGCTGCTT CACCTACCTA CGATACGGCA TCTTCACCTA CTACTCCTAC GGTGGACATG
TCCTTCCATC CCCGAGCATC TACCGATTCG ACCGTTTCTC TCCCGTTGGC ACTCCACACG
ACCGAAAGTC TGCCACCTGG CGCCAGACGA GGCTACGAGA ATCGATCGAC ATCATTCTCT
GGCTCTTCTC GTGAAATCAT TCGTCCACTC TCCAACCCCG CTGCTAGACT GAGTAACCCT
CAAGCTCAGA GTCAGACACG CGCCCCTCTT CCTTCCTTAT ACCCAGCTAT CCTTTCAATG
GTCTCTGCTG CGTTCAAATC ATACATCCCT CTTGCCGACC TCACCAAAGA TGGTATCACG
TACAAAGATT CCTTCTCCGG CCAAGCTGCT GTGACACTGA TCGCAGAGCT CATCAAGACG
TCTGATCGAA ATTTGGCTCT GCTGCTCGGT CGAAGCCTTG ACGCCCAAAA GTTCTTTCAT
GATGTGACAT ACGACCACCG ATTGAGGGAT AACCCTAAAG AGGTGTACCG ATTTAAAGAC
AGGCTCGCTG CACCCTTTAC GGACACAAAC GGCAATGGGG AAAGCCCAGT TTCGGAAGGG
AGATTGACGA GGAACGGGAG TGGAGCGTCA AGTACGGCGA TGGGCTTGGG TGGTGGATTG
AAAGCTTTGA CAGCTGCAAG GCCTGCAGAT TCTTCCTCTT CAATGCATAC TGAATCTACA
CCAGTATCTA TGACCCCATC TCGATCTTCG ACCATGCCTT TCCTCGACTC CGACTCGCCA
GATGGCTTGG ACAGCGAAGA TACTCTCCCA GTGGGTGTAT TCACCCTTCT TACAGACTGT
TACTCCCCCA CATGTTCGCG CGACAGTCTT TGTTATTCTA TCAATTGTCC CAGAAGACTA
GAGCAGATGA AGAGGCTAAA CATGAAGCCG GAGCCTGGGT TGAATAGGAA GCTCAGTCGT
GAGAGTTTAG TGGATGTCAA GGAGACTGGC ACTCTGTGGA TTCATTCTGT TTCGCAAGAG
ATCTTGGATA GTGTGGATGA TAAAGAGAAG AAGAGGCAGG AAGCCATCAA CGAAGTTATC
TACACGGAGA GGGACTTTGT CAGGGATCTG GAGTATCTTC GAGATGTGAG TAGACCTTAT
AGGTAATTAC CAAGTGCTAA CGACATATAG TCATGGGTCA AACCGCTACG GACGCAAGAA
GTCATCGATG CCAAGCGCCG AGACGACTTT GTCCGACAAG TATTTTGGAA TGTCCACGAC
GTCCTCTCCG TAAACCATGT CCTCGCCGAA CGTCTCACGA AGCGCCAGAA AAAGGAACCA
GTCGTGTCAC GTATTGGCGA CATCTTTCTC GAACGTGTCC CACTCTTCGA ACCGTTTGTC
ACCTATGGTG CCCATCAACT TTTCGGCAAG TATGAATTCG AGAAGGAAAA AGGCGCGAAC
CCAGTTTTCC AAAAGTTTGT GGACGATACA GAAAGAAAAC CAGAGTCAAG AAAGTTGGAG
TTGAACGGTT ACTTGACAAA ACCCACTACA CGTCTGGGTC GTTATCCTCT CTTACTGGAA
GCTGTCCTCA AATATACTCC TGACGATCAT CCGGATAAGG AGGATTTGCC AGAGGTGATC
AAGATGATTA GAGGGTTCTT GACGAAAGTG AACGCGGAGA GTGGGAAGAG TGAGAATATA
TTTGAATTGG CGCAAATCGA GCAACAGCTG GTGTTCAGGC CAAATGAAAG GATTGTAAGT
CTCGAAGTGA GAAAGATTAT GAGCAAATCT TGACGTTGAT ACGTTCTTAT AGGATCTGCG
ACTGCGAGAC AAGAATCGGC AGTTAGTGCA CAAGGGTCCG TTGAAGAGAA GAGGTGGCAA
TCGAGAAGAG ATTGCAGATT TACTGGGCTT TTTATTTGAC CATGCGTTTT TGCTTGTCAA
GCCCAAATGG GTAAACAAGA GTGAGCAGTA CAAGGTTTAT CGCCGAGTGA GCCCTTTTTT
GTCAAATAAA ATGCTGCAAA ACATGAAGCT AACAACTTCT GCGTGGAATA GCCAATTCCT
CTCGAGTTAC TTGTCCTCGT CACTCCAGAT GAACAATACA ACTCTGGCAA ATTGTCATAT
GGCCATGGGC GTTCCCGACT CATCACACGT CACCCCAACT CAAAAACCAA CCACTCTTCC
CAGAATAACT CTATAACAGC CCCTCCGAAG CCAGAATCAA AACACGGTTT TTCGATTACG
ATCCTTCACC TCGGCAAAAA AGGCTATTCG ATGCAGCTAT GGGTTGACAC TCATATTGGG
AGGAAAAAGT GGTTGGAGAA TATAGATAAG CAACAAGGGT TGTTGAGGGA GAAGAGTACG
GTTTTCGTTA GCGAAACTAT CACTGAAGGA ATTTTGAGCG GTGTGAGGAA AGTGAACTGT
TCTAGTCCTT ATGGTGAGTT CTTTTCGTTG TTGTGAATGA TGTATGCTGA TGATTGGGAA
GATCAAGGGA ATAGGATGAT CTTCGGTACA GATGAAGGTG TTTACTTCGC CAACTTGCGC
GATGAAAAGC TCCGCGAACC AGTAAAAGTC ATTAACCTTA TCGACGTCAC TCAAGTCGAT
GTTATCGAAG AGTTCCAACT CCTCATTGTC CTTCACGAGA GATGTGTCAC TACCTTCCCA
CTTGACAGTC TTGACCCTTC CGATCCCAAT GCCGCTCTCA AGCGAGGGAA ACGCATTTCA
TCGCACACAA GCTTTATCAA ATCGGGTGTA TGCCTCGGCA AGACTTTGGT TGCGATCGTC
AAGAGCTCAA CGTTGAGCAG TACAATTAAA GTGATGGAAC CTGTGGATCT GAGTCAAAAT
CGGAAAAAGA CACAAGCGGG GTTTATGAAA AGGCTCAATG GCAAAGACGA CGCATTGAAG
CTTTTCAAGG TTAGTCATCA TTTCATGTTC CTGATTCGCA GATTCTGACA CTTCATCTAG
GAATTCTATA TTCCTACGGA ATCCAGCTCT GTCCATTTCC TGAAGACGAA GCTCTGTGTC
GGCTGCACCA AGGGGTTCGA GATTGTCGAC CTAGAGACAC TTGATATGCA GGGTTTGCTC
GATCCGTCAG ATGGATCGCT GGACTTTGTG TTAAAGAGGG ATAACGTCAG ACCGATTGCA
ATTTACAGAA TCGAAGAGGA TTTCTTGCTG TGCTACGACG GTGAGTCTAT ATGGTAGCCC
CAGATATTTT GCAAGATGCT GATGGAAGCA GAATTTGCGT TCTATGTAAA CAAGAACGGA
TGGCGGTCAA GGCCTAAATG GGCGATTGTT TGGGAGGGCA TTCCCACATC TTTTGGTAAA
GTCTTACCAT ACTGAGCGAT TGCCGAAACA GATGAACTAA CGAAAAATAG CATTGCAATA
TCCATATGTC ATTGCGTTTG AACCGACGTT CATTGAAGTG CATCACGTTG AAACTGGCCA
TCTGGTCCAG ATCATCCCTG GGAACAATAT CCAATGCCTC TTCGCCGACA CTCCTCCTTC
ACGAGTCAAT GCCCCTTTAC CACCGAATCG CATGATGTAC GCTCCGCCCA CTCTCGGGAC
TCCCCCTTAT GCCCGTCCTC CCAATATGCC AGGGTATCCT GCTTATCCCA ACGTATCTTA
TCCTGGTCAT CCCCAACAAC CTCGACAAAC CTCTAACGGC GCATATCCTC CTCACCGCAT
AAATCAAGCA CCTAGTGCCG GAGTACGTCA CCCTCAGCAA ACGCCAATGG GCTACGGTAT
GCCTGCACCC CACCCGCCAC CCCTTATGAA CCGATTCGCA AGGCCTCAGG TTGTTTTCGT
CAGCGATGAC AGCCATGTTC AGTTCCTCAA ATTCCCACCT GCTTCTCATT CTCATCCTCA
AAGGCCTGTC ATGACGCACT ACCAGACTGC ACCTGCCGGG CACTCAGCCA GATCCTCTCG
GTAACCCTTA TTAATTTAAC GCCTTTTATA AACACTTAGC ATACGATACA GCATCTTGAT
AGGCGATAGT TCGCCTTCAT TACTTTGATT TGATTTGAAA TTTTACATAT TGAGCATCGG
GTGGACGTGA CTGACATCAC TATCGAAGGA TGGAAAAGGA GAATGTCATT ACCGTGTACG
AGGCTGTTTT GTCAACCCTC TGGGCCTTTT CCTTCACTTG TCTCATTCCT CTGTTTTTGT
AGCATCATTT ATCCTTGGTC GTTAGTGGTG ATACATTCCA CATAGTATAC GATTGGTACG
ATTCCCCATG CATAAAGCTC ATCAAAACCT AG
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| Protein sequence | MPRLPSGPTQ AFPAGAMTPA QAYQASQGYP TSSVAFPRPS TASPAIPTQA TQNIGTPFDP
SSSVTSFSTT NSATSRIPTS TSITSFHKPT SQSPSLAETS KERSATPDYI GKMGQLASRS
PAASPTYDTA SSPTTPTVDM SFHPRASTDS TVSLPLALHT TESLPPGARR GYENRSTSFS
GSSREIIRPL SNPAARLSNP QAQSQTRAPL PSLYPAILSM VSAAFKSYIP LADLTKDGIT
YKDSFSGQAA VTLIAELIKT SDRNLALLLG RSLDAQKFFH DVTYDHRLRD NPKEVYRFKD
RLAAPFTDTN GNGESPVSEG RLTRNGSGAS STAMGLGGGL KALTAARPAD SSSSMHTEST
PVSMTPSRSS TMPFLDSDSP DGLDSEDTLP VGVFTLLTDC YSPTCSRDSL CYSINCPRRL
EQMKRLNMKP EPGLNRKLSR ESLVDVKETG TLWIHSVSQE ILDSVDDKEK KRQEAINEVI
YTERDFVRDL EYLRDSWVKP LRTQEVIDAK RRDDFVRQVF WNVHDVLSVN HVLAERLTKR
QKKEPVVSRI GDIFLERVPL FEPFVTYGAH QLFGKYEFEK EKGANPVFQK FVDDTERKPE
SRKLELNGYL TKPTTRLGRY PLLLEAVLKY TPDDHPDKED LPEVIKMIRG FLTKVNAESG
KSENIFELAQ IEQQLVFRPN ERIDLRLRDK NRQLVHKGPL KRRGGNREEI ADLLGFLFDH
AFLLVKPKWV NKSEQYKVYR RPIPLELLVL VTPDEQYNSG KLSYGHGRSR LITRHPNSKT
NHSSQNNSIT APPKPESKHG FSITILHLGK KGYSMQLWVD THIGRKKWLE NIDKQQGLLR
EKSTVFVSET ITEGILSGVR KVNCSSPYDQ GNRMIFGTDE GVYFANLRDE KLREPVKVIN
LIDVTQVDVI EEFQLLIVLH ERCVTTFPLD SLDPSDPNAA LKRGKRISSH TSFIKSGVCL
GKTLVAIVKS STLSSTIKVM EPVDLSQNRK KTQAGFMKRL NGKDDALKLF KEFYIPTESS
SVHFLKTKLC VGCTKGFEIV DLETLDMQGL LDPSDGSLDF VLKRDNVRPI AIYRIEEDFL
LCYDEFAFYV NKNGWRSRPK WAIVWEGIPT SFALQYPYVI AFEPTFIEVH HVETGHLVQI
IPGNNIQCLF ADTPPSRVNA PLPPNRMMYA PPTLGTPPYA RPPNMPGYPA YPNVSYPGHP
QQPRQTSNGA YPPHRINQAP SAGVRHPQQT PMGYGMPAPH PPPLMNRFAR PQVVFVSDDS
HVQFLKFPPA SHSHPQRPVM THYQTAPAGH SARSSR
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