Gene CNI04230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI04230 
Symbol 
ID3259777 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand- 
Start bp1121846 
End bp1122944 
Gene Length1099 bp 
Protein Length329 aa 
Translation table 
GC content51% 
IMG OID638258918 
Productspliceosomal zinc finger-containing protein, putative 
Protein accessionXP_572920 
Protein GI58271528 
COG category[R] General function prediction only 
COG ID[COG5152] Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAG CGCCTGCACC AGTAGTCACA TTCAAAAAAG GCCCTTCTCG CCGTCCCGCC 
CAATCTCGCC AACGTCGTCG CTCTCCATCG CCTCTCGACC CTGTCGCTGA AGCATCCGCA 
TCCGCTTCCG GCTCCAATGT CGTTCGACCG GAGAGAAAAT CTCTCGCTAA CCCTCTCGTC 
CAAGGCACAA AGCGTCGGAG AACAAATGCC AATAATGAAG AGGAAGAGGA TGGTGTGGGA 
GGCGGATTGG ATGAGTTTGA TTATGCTGCC GAAGGAGGAC TGACGAGGAA AGGGGATGAG 
CTTGCAACGA GGGCAAATGA TTGGGATTTG GAGGATGTAG ATGGACAAGG GCAAAGGGAT 
AAGAAAGTCA GGCTAGATGA GGTGAGTCAT GCTCTGAATT TAGTTTATTT ACGGTGAGAT 
TCTGACAAGC CTCAAAGGAC GGCGAGATCG TGACAGATGA CGGCCTGTAT CGAGGTGCAT 
CCGCCTACTT ACCGACAATA AACAAGACCC GCGAAACACT CGACAAGAAG ATGAAATCCG 
GTCCTATCAA AGCTACCTCC CACGTACGCA CAATCACCCT CATGGACTAC CAGCCCGACG 
TCTGCAAAGA TTATAAAGAG ACCGGTTTCT GTGGATATGG CGATTCTTGT AAATTCTTGC 
ATGATAGAGG AGATTATCTG GCGGGCTGGC AGCTGGATAA GTTGCCGGAA GAAGGAGTGA 
GAGAGGTAGA GGAGGAGGAT GAGGAAGAGG AAGTACCGTT TGCGTGTTTA ATCTGTAGAC 
AACCGTTTAC ACAGCCGGTG GTTACCAAAT GCGGGCATTA CTTCTGCATG GGGTAAGTAT 
TCATTCGCTC ACTTTCATTT TTCCCGGCTG ACAAATATGT TCTAGGTGCG CTGCGAAACG 
ATTCCAAAAA TCACCCAAGT GCTACGCCTG CGGTGCCCCG ACGCAGGGTA TATTCAACAT 
CGCCGATAAA GTAATTGCCA AAATCGAAGC TCGTAACAAG GCAAGGCGAG AGGCGAGAGA 
GGAACGGGCA GAGCAAACGG GTGGTGGCGG GATTGAGATT GGTGGTGGGT CTGATGAAGA 
GGGTAGCGAT GAGGAGTAA
 
Protein sequence
MSEAPAPVVT FKKGPSRRPA QSRQRRRSPS PLDPVAEASA SASGSNVVRP ERKSLANPLV 
QGTKRRRTNA NNEEEEDGVG GGLDEFDYAA EGGLTRKGDE LATRANDWDL EDVDGQGQRD 
KKVRLDEDGE IVTDDGLYRG ASAYLPTINK TRETLDKKMK SGPIKATSHV RTITLMDYQP 
DVCKDYKETG FCGYGDSCKF LHDRGDYLAG WQLDKLPEEG VREVEEEDEE EEVPFACLIC 
RQPFTQPVVT KCGHYFCMGC AAKRFQKSPK CYACGAPTQG IFNIADKVIA KIEARNKARR 
EAREERAEQT GGGGIEIGGG SDEEGSDEE