| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI04100 |
|---|
| Symbol | |
|---|
| ID | 3259439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | + |
|---|
| Start bp | 1090284 |
|---|
| End bp | 1092945 |
|---|
| Gene Length | 2662 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638258905 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_572951 |
|---|
| Protein GI | 58271590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAGCCAGCCC CTTGTCTCCA TCCGCCTGCG TTCTGCGCTG CTTGACATCA TCTCAATCCC
AGCCGGTCGC AGCTCTCACA AGTTTCAGGG AAGGCACACA GCTATCCCCT TCCCATCCCC
CACTGTGCGT CATACCATCC TTCCATCTCA AGCCGTTACT TCATTGACAC ACTTTTGGTA
TTGCTGGTCA TAGCTCTCCT GCGCTGCTAT CTGTGTCGAA ATTCCGGTAG GATCGTCGGT
CACTTACCAC AATCATTTCT CCGTCGGCAA ACCCGGGCGT CGTTTTCGGT ACCTCGACAA
CTTCCAGTGC CGGATAGCAT TCATCGTAAA TATCTTGGGT CTATCACGTC TTGCAACATC
ACGTACCATA TACACGTTTG GATCCGATTA AATATCCATC CTTTCGATTC CTTCTCTCAT
CTCGCTGACG ACGTTCTGAT CCGACACTCG ATTCCCAAGT GGCACGCATT CCGGTGGTCG
CATAACAATT TCATTTATAG TCATCACGCG TCACCCATCC ATCTTGCCTG AGCTTCTGAC
GGCCACCGTG CGACCCTTAT TGAACCAGTC TATTGGCACC CTTGCAACAC AGGTTACTGC
GGGCTCTATA TTGTTCAATC TTTTGACTGT CAATATTTCC TGTGATTTAC CCAAAACATT
CCAAGCATCT CCCCGCTTTC TCTGTCTATG ATATGGACCA ATCGTCTGGC TCTTCATCAT
CTCGCCATCT GCCGTTTGGC GGTCCTGGGG CACGAACAAT TCTAGACGAT GAACCAGGTC
CATCCTCTCT GCCGGATTCA CAAGGGTACC CTGAAAATAT GTATGAATCA CACCCAGACG
GTGCCCAGCA ATTATCCCAG CAGTCAAGAG AGACCCACAC TGCTTCACCT TCCCTAGACG
GACCGCCAAT CAAGCGCGTA GGGGGCAAGG CAAACGTCTC ATCGGCGTGC GGGCCCTGCA
AGCGGGCCCA CTTGGCGTGT GACATTGGAC GACCATGTAA GAGATGCATC AACATGGGTA
AACAGGATCA ATGTGAGGAT GTACCGGTAA GTCTCGTTTT TTTACTAATT TCCCGTCGAT
CCTTTTCTAC TCTTCCGTTG GTCAGCTATT GATGGCCTTT TCAGCACAAG AAGAGAGGAA
GGCCAAAGGT CGCAAGACCG CCGCTCGGAG AACCGTACCA TCGAACATCT AGGCCAGTGC
CAGTGGCTGC CGATGCTGGT GGAATAGGCA GATGGAGAGG CCCATCAGTC TACGATCCGT
CTTTCGTGCC GAATATGGAC GCCGCACCTG GTCCTTCCAT GACTGGCAGA GTATCCCCCC
GCAGGGCCAG CTCGTCAAGC ATGGACGCTT CTGCTGCTAG TTACCCCACT CCTGATCCTA
CCGCTCATCC CTTCACCTTG TTCACCACTA CAGACTTCAA AATCTTGCGA GCTAGTCCAT
CCTGCTTCTC ACTGGTTGGC TACCACCCTA ACGAGTTCGT CAACCTCAAC CTTCTTGATT
GGATTCATCC ACAAGATAGA CACTTGATTG ACATGGAGAG AAATAAGCTG TTGGCAGTAC
CGTATGTAGA GGGACAGTTG AGGTCTGTCG AAGTGACCCA GGCGGCAATC ACCCAAAGGA
CCGAATTGGA ATTGTTGTCA CCCGCTGAAG GAATGCGTGA ACCCTATCCA AACAAGAATG
TCCGTGTCCT TCATGTGGAT AACCGCTTTA GCCCCTTCAA TGTCCGACTT CACCTTGGCG
GCGGGCTTGG TGCAAGCCTC TGGCAACCGG TAACTCTAGG CAGAGTGTAT CTGGTCGTTT
CCTTCCTTGC GATCCCTCGC AGTCATCATT TCCCTCCCGA CGTACCTCCG GTACGACGAC
TTTCACAGAT AAGCCCTCCA ACACCTATAA CCCCAGCTCC TGGCATGTCG GGTCAAGGGC
TCCCAGGTTT CTCTTCCATC GCTGCCGGGG TTGACGGCCC TCAACCACGA TACGACCAAC
CCCCACCACA AGTATACTAC CCCCCACCGC AACCTCCAAC GGCTCGTCCA CCACCACCTC
TTTCAGCACA GCCTTATCCC TCCTACCCAC AAACGGCCAT GCCGGCTAAT GCACCCATGT
ATCCCCCTCG ACGGTCGTCT TCGCCAAACT CTGCATACCG TACACCGCAA ACAGCCAGTT
ATCCTATTAG CCCTACAGAG TATCAAATGC AGCCTGGATT TTACCCGCCT GCTGGACCAC
ATCCTCTTGG ACCGCCTACA GTCATTGCCG GTGGAGAGTA CAGACGGTCG AACTATGAGG
AGTGGAGGAT GGCGCAGCAA GCCGGTGCAC CCGCATCTCT ACTCCCTCCT AGAGATCACG
CGGCGGTCAC CGGTGGATCT TCAAACGATG CAACGAGACG AACTTGGGAG CTATAAGATC
GGCGCAAAAT GGTTGAGATG CCCAATAAAT TTCAAATCCC CAATGAAAAT TTTGGGAAAA
AAACAATATG ATAATTTCAT GGATTAGACC TGTAATGAGC ACTTGATAAT GTCTTGAATG
GAAAAACGGT ATTATTGTAG AGTTTCACGT ATGGTTAGTA GAGCAAACGC GTCGTGTCAT
GACTTATTAA CGCTTTTCTG TTGTTAGACG TGCATACCCC TCCCAGTGGC TTTTGCAATG
ATGATTTGGG AAATTACAGT GA
|
|---|
| Protein sequence | MDQSSGSSSS RHLPFGGPGA RTILDDEPGP SSLPDSQGYP ENMYESHPDG AQQLSQQSRE
THTASPSLDG PPIKRVGGKA NVSSACGPCK RAHLACDIGR PCKRCINMGK QDQCEDVPHK
KRGRPKVARP PLGEPYHRTS RPVPVAADAG GIGRWRGPSV YDPSFVPNMD AAPGPSMTGR
VSPRRASSSS MDASAASYPT PDPTAHPFTL FTTTDFKILR ASPSCFSLVG YHPNEFVNLN
LLDWIHPQDR HLIDMERNKL LAVPYVEGQL RSVEVTQAAI TQRTELELLS PAEGMREPYP
NKNVRVLHVD NRFSPFNVRL HLGGGLGASL WQPVTLGRVY LVVSFLAIPR SHHFPPDVPP
VRRLSQISPP TPITPAPGMS GQGLPGFSSI AAGVDGPQPR YDQPPPQVYY PPPQPPTARP
PPPLSAQPYP SYPQTAMPAN APMYPPRRSS SPNSAYRTPQ TASYPISPTE YQMQPGFYPP
AGPHPLGPPT VIAGGEYRRS NYEEWRMAQQ AGAPASLLPP RDHAAVTGGS SNDATRRTWE
L
|
|---|
| |