Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI03860 |
Symbol | |
ID | 3259508 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 1040053 |
End bp | 1043033 |
Gene Length | 2981 bp |
Protein Length | 827 aa |
Translation table | |
GC content | 51% |
IMG OID | 638258881 |
Product | chitinase, putative |
Protein accession | XP_572898 |
Protein GI | 58271484 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTATCTCT TTCAACCCCT TTATCTGGTA ATCCTTCGCA GTCCTTCCCT CACCTTCTTC TTTTATCCCT CTTTGCCCAA GGGGCCCACA TTCTCTATAA TTTAACTGCA GTCGACCTGC ATAACAACTT GTCAAGAGCC GGCTCTTGGC CCATATCTCT AGCTCAGGAA GCTTCCTCTC TCTTCTCAGA TCACATTCTC TACCATTTAT CACAATGTTA CTCTCAACTC CAGCCTTCCT TTCATTTGCC CTCCTTCTCG TCTCCCAGTC CTCCGCCCAG GGACACACTG CTCCTCCTGG CCGACACCGT CACCCTAGGA TCTTCAAAGA CCTTCAAGAG CGTGGCCAAC TGGATGAGCG GTTGCTCCCT ATCACCGCTA CCACCACTGT TGTGGTCCCC ATGACCGCCA CCAGGACTAT CTGGGTTGAT TCCACTCAGT TAGTCCTTGG TGACGGTGGT AATGATGGAG ACAATGATGC TTCAGGCGAT GTTAGCAGTG TTTGGTCTTC GCAGGCGAGC CAGAGCACTG AAGGAGCATC CACAAGCAGT GAAGCTATGT TACCTACCGC CTCAGCATCA TCATCAGTTT CAGACTTGAC ATCATCTTCC TACGACACCG ACGCCCAGTC ATCATCCTTT GTCACCGGCT CTTACATCGA AGATGTCACG GCGACGTCTA GTCTTCTTTC CGATTCCCTT CCTACTTCCT CCTCCATCTC CTCCGATTAT CCTTCCCTTT CTGTTTCCCA ATCTGAAGCC TCTTCTTCCA CCACTGGTGT CGCCACATCC TCAGCCACTG TGACCGACTC CAGCTTTTCT ACCTTTGCTG AAGAGCCAGC CTCAACTGGA TCTTCATCGT CTCAGTCAAT TGCTGCCGAT TCTGCTCCTA GCTCTTCCGC TTCGACATCG GCTTCAACAG GATCGAGCTC TTCTCGGCCT ACATCGCTGC CCCAAACCGA GTCAGCGACC AAGTCTGAGG ATTTGGGCGC CGCGTCGACT AACATTGCCA GCAATGCCAC CGTGTCTGAC AATGTGAGTG TGTCGGAAAG TCAGTGGGCG TCAGTAACCT CGACCAAGAG CTCTTCTATC TCCGAAACCG GATCAGCAAG CTTGTCTGGG AGTGAGTCTG TATCCCTCTC CGACTCATTC TCTATCTCTG CGACATCTAC AGATTCTGCG GCGGTTATAG GAACGGCTAG CTCTTCTTAC TCTAGATTCG AGTCATCAGC CACTGCTTCT GAGACTGCCT CAGCTTCGGC CAATGAGACA GGTTCCAAGA CCAAGTCGCA CGGGAACTGG TGGGAGACTA GCACCTCTTC TTCCGCCTGG GCTTCTTCCT CTTTGAGCGC ATCTGAAAGC GCCTCAGAGA GCGCTTCTTT GACAGCGTCG GGTACGGTCT CTGTTTCTGA CTCTTCAACA TGGCCTGAGA GCGCTTCAGT CTCCTCTGCT GCCACAGCTA CAACCTTTGA ATCATCTACT TCCATTTCCG CCACCTCTAC CTCTACCTCT AGCTCTTCTT CGCCTACCTC TACTCTTGCC TCTACTCTCA TGTTGGGATA TTATCCTGAT TGGTCCGCCT ACTACCTTTC TCCAGAGTCT GTCGACTGGG ACCGCTTCGA CATCCTTGAC TTTGCTTTCG CCATCCCCAA CTCTGACGGA TCCCTCTACT TCACCGATGA TAGCTCTACA GACTCCCTTC AGCGATTGGT CACTACTGGT CACGCTGCGG GTAAGCGAGT CAAATTGTCG ATCGGTGGCT GGACTGGGTC TGCGTACTTC TCTACCATTG TGGCCGATGA TTCTCTCCGA GCTACCTTTG TAAGCAATAT CTATGACATC TACAACCAAT ACAACCTCGA TGGTATCGAT ATTGATTGGG AGTACCCTGG TACTGCCGGT GCCGATGGTA ACGCCGTGTC ATCTGATGAC TCTGCCAACT TCCTCATTTT CCTTCAAGAC TTGAGGGCCG CTTTGCCAAG CGAGGCCATC ATCACCTCTG CAACGCAAGT CTGGCCATTT GCGGACAGCA ATGGTAACCC GATGACCGAT GTGAGCGAGT TTGCCAAGGT CCTTGACTGG ATTTTGATCA TGAACTACGA TGTCTGGGGT TGTAAGTATC ACCATAGCTT GTACGCGAAT CAATATTGAT GCCATCCGCA GCTTCCAGCA CCCCTGGTCC CAATGCTCCT CTCTCTGATG GTTGCGGTAA CTCTACTCAG CCTCTCGCCA ACGCTTATGC TGCAGTTTCC TCATGGACCA GTGCTGGCAT GCCCGCAAAC CAGATCACCC TCGGTGTCCC TGCGTAAGTG TTACTGGTGT TTTACTGACA AGGTGCTGAT CAACTTTTAC AGCTATGGTT ATATCCAAGT CTCTTCGGCT TCTTCCCTTA TTCAGCGACG CTCTCTCCCT CTTCTCCCTC ACAAACGATC TAAGCACGCC AAGAAGGCCA GCTACGTCAC AGTTCAGAAC GAGTCTGGAG GTACGACCGA CGGTCAAGTC ATGTGGTATG GTCTCCTAAA CCAAGGCGCT TTGACCTTGA GCGATGGAGA GTACGTCGCT ACCGGTGGTT TCACCAGACA TTGGGATGAC TGTTCTAGTA CTGTAAGTCC TCGGCCACTC TACTGCATGA TGGATTCTCA TTGACTCGTC GTAAATTAGC CTTGGCTCAA GTCTTCTGAA TCCGGCCAAA TCGTCACCTA CGATGACCCC CAATCTATGA ACCTCAAGGC TCAGTTCGCT GCTCAGGCTG GGTTGAGGGG ATGTAATGTC TTCTCTGTCG ATGGTGACTG GACGGGCTCG TCCTGGCCTT TGACAGATGC TGTCAGGAGT GGTTTGGGAC TTCCCGCTGT GTAATAAGAG AAGATATGGA ATGTTGTAGG AAAAAAAAAG AGCGTGGATC TAAACAGGAT ATTTCTGACC TTGATGGTCT AGAGAACAGT ATATAATTGC CAAATTGATG CATTGCACCA CATACTATAA T
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Protein sequence | MLLSTPAFLS FALLLVSQSS AQGHTAPPGR HRHPRIFKDL QERGQLDERL LPITATTTVV VPMTATRTIW VDSTQLVLGD GGNDGDNDAS GDVSSVWSSQ ASQSTEGAST SSEAMLPTAS ASSSVSDLTS SSYDTDAQSS SFVTGSYIED VTATSSLLSD SLPTSSSISS DYPSLSVSQS EASSSTTGVA TSSATVTDSS FSTFAEEPAS TGSSSSQSIA ADSAPSSSAS TSASTGSSSS RPTSLPQTES ATKSEDLGAA STNIASNATV SDNVSVSESQ WASVTSTKSS SISETGSASL SGSESVSLSD SFSISATSTD SAAVIGTASS SYSRFESSAT ASETASASAN ETGSKTKSHG NWWETSTSSS AWASSSLSAS ESASESASLT ASGTVSVSDS STWPESASVS SAATATTFES STSISATSTS TSSSSSPTST LASTLMLGYY PDWSAYYLSP ESVDWDRFDI LDFAFAIPNS DGSLYFTDDS STDSLQRLVT TGHAAGKRVK LSIGGWTGSA YFSTIVADDS LRATFVSNIY DIYNQYNLDG IDIDWEYPGT AGADGNAVSS DDSANFLIFL QDLRAALPSE AIITSATQVW PFADSNGNPM TDVSEFAKVL DWILIMNYDV WGSSSTPGPN APLSDGCGNS TQPLANAYAA VSSWTSAGMP ANQITLGVPA YGYIQVSSAS SLIQRRSLPL LPHKRSKHAK KASYVTVQNE SGGTTDGQVM WYGLLNQGAL TLSDGEYVAT GGFTRHWDDC SSTPWLKSSE SGQIVTYDDP QSMNLKAQFA AQAGLRGCNV FSVDGDWTGS SWPLTDAVRS GLGLPAV
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