Gene CNI03790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI03790 
Symbol 
ID3259424 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp1012613 
End bp1013834 
Gene Length1222 bp 
Protein Length289 aa 
Translation table 
GC content53% 
IMG OID638258874 
Product2,4-dienoyl-CoA reductase, putative 
Protein accessionXP_572626 
Protein GI58270940 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.128522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATATCCACC ACATCATGTC TCCTCCTCCA CCCCTAACGC CAGACCCAAA GTCCACCTTC 
AGGCCAGACT TATTCAAAGG CAAAGTCCTC TTCTGCACAG GAGGCAGAAG CGGTATCTGC
TACCAGATCG TCGAGACCAT GATGTCGCTT GGTGTCGACG CAGCCATTGT CGGTCGAGAG
TAAGCATCTC GTCATATAGC GTCCTTTTGG GAAAGCTTAA TAATGGCCTG GGTGACCACC
GTAGTGCCAA AGGCCTCGAG GAATCTGCGA AAAAGCTAGA AGCGTCGACA GGCGGAAAAT
GCATTCCAGC GCCAGCCGAT GTGCGACAGC CAGATCAGCT AAAAGATGCC GTGAAGCGTA
CACAAGAGGC TTTTGGTAGG ATTGACTTTG TCATCTGCGG TATGTCCCCA TGATACCTCC
GTATGCTCAG AGAATAAGGC ATACTGATAC TCGGTATAGG CGCCGCTGGC AACTTCCTCG
CCCCCATCTC TGGTCTCTCC GAACGCGCGT TCCGCACCGT CATCGAGATC GACCTCTTAG
GCACTTACAA CACACTCAAA GCTACACTCC CCCTCGTCCG TGCATCTCGT GGTTCATACG
TCCACATCTC TGCCACACTC CACTACAGAG GGGTGCCCTA CCAGTCTCAT GTGGGCGCTG
CTAAAGCCGG TGTGGACGCT CTGAACCATT CGATCGCTGT GGAGGAAGGA CCATGGGGTG
TAAGGTCGAA TGTGATTGCG CCTGGGTATG TTCATATCTT TCCAAGCCCA TCTTCTTTTA
AAAAGGAAAA TGACTGACTC CTGCTTCTGT TAGACCGATC GCAGAGACCG TCGGCATGGA
CAAGCTGGGC ACCAAAGGCC GTAAGGTAGA ACGCGAGGTG CCGCTAGGTC GACTAGGAAG
TACTGGTCAG TTCTCTCCCA CTCTCCTGGC CACATGAAGT ATGAAACAGT CCACTGACGG
AGAGTGGATA TCAGTGGATA TCGCAAATGC CGCGGTGTTC TTATTCTCTC CTGCATCCGC
TTGGATTACC GGGGCCACCC TCGTACGCCC TCGTTTTAAT GCCTGGCCGC GTTCCTCTGC
AGGGAAAACA AAGATCCCAA GCTGACTCGA TGAATAGGTG GTTGATGGTG GTGAACACCA
TATCCGATCG ACGATGCTCC CATATCCCGA AAGTTTGCTT GACCCAGAGA GCGTCAAGAG
TCTTATCAAG CCACGACTTT AA
 
Protein sequence
MSPPPPLTPD PKSTFRPDLF KGKVLFCTGG RSGICYQIVE TMMSLGVDAA IVGRDAKGLE 
ESAKKLEAST GGKCIPAPAD VRQPDQLKDA VKRTQEAFGR IDFVICGAAG NFLAPISGLS
ERAFRTVIEI DLLGTYNTLK ATLPLVRASR GSYVHISATL HYRGVPYQSH VGAAKAGVDA
LNHSIAVEEG PWGVRSNVIA PGPIAETVGM DKLGTKGRKV EREVPLGRLG STVDIANAAV
FLFSPASAWI TGATLVVDGG EHHIRSTMLP YPESLLDPES VKSLIKPRL