| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI03490 |
|---|
| Symbol | |
|---|
| ID | 3259762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | + |
|---|
| Start bp | 943951 |
|---|
| End bp | 946552 |
|---|
| Gene Length | 2602 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638258843 |
|---|
| Product | sugar transporter, putative |
|---|
| Protein accession | XP_572882 |
|---|
| Protein GI | 58271452 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.16128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCATCGCATA CCTGAGCCAA TTCTAGATAG TTCTAAAATC TCTTCCGCGC ACCAGTTCTT
CTCCAACAAC GGCCGACGTT GACTGTGTAT TTCCCACCAA ACAACCATCT TTCTAAAGAA
TTCGATTTCG ATATTCGATT CATCACTCGA CATTTAAATT GATCCCAATC TTTCGATCCT
CCCAGCACCA CATAGCCCAA TCGAATAAAT AATATGGCCG GTGAAGACCT TGCTATCACC
TCGACTTCTG TCGAGAATGT CCCCAACAGT CCTTCTCGCA AGGTGTCTGA AGATGGACTA
TTATTGCAGG AAGACAAGGA AATGGCTGCC ATGTACGCCA ATGCTGCCGC CGCAACAGGT
AAGTGAACAT TCTTCCCTTC CTTTCCGTGT CTCAACTGTA GATGCAAATC GCTAATACGT
GCCTGGATTT ATAGAAAAGG AACAGAACAT GACTCTTCTA GAGGGTCTCC GATTGTATCC
CAAGGCCATC GCCTGGTCTA TCCTCATCTC TTCATGTTGT GCCATGGAAG GCTACGACAT
CTCTTTACTT GGTAACTTCT GTAAGTTTCA TTCCTTAATC TATGGATCTC ACTTACGTGG
AGCACAGACG CGTTTGACCC TTTTAACCGA AAATTCGGTG TGGAACTCGA TGACGGTACT
TGGCAGGTTC CTGCACGATG GCAAACGGGG CTGTCAAACG GTGCCCAGTG TGGGCAGATC
ATTGGTTTGA TCGGTGAGTG GTGTACACGC TCTCAAATCT TTTGTAGCCA CTTACTTTTC
CTGCAGTCAA CGGTATTTTC ACTGAACGAT ATGGTTATCG AAAGGTTCTT ATAGCGAGTC
TTCTCTGGCT TGCGGCTGTT ATCACCATTT TCTTCTGCGC TCCCAACATT CAAGTCCTCC
TTGCAGGTGA GATTTTGGCC GGTATTCCTT GGGGTGTTTT CCAGTCTATT GCCATTTCCT
ATGCCAGTGA TGTCTGCCCT ATCGCTCTTC GTGGCTAGTA AGTCTACTCG CCAAATTTTA
GCAACGGATT TTTATATTAA CCTTTTGCTT AGCTTGACCT GTTATGCCAA CTTCTGCTGG
GGTTGGGGCC AGCTCATAGG TGTCGGGGTC ATCAGGGCTA TGTTCTCACG TGATGATCAG
TGGGCTTATC GTATCCCTTA TGCTGTTCAG GTGAGTTACG ATTACTTATT GACCGTCTTC
ATTGCTCAGG GGTTATAGTG GGTATGGCCT CCTCTCATTC TCGCGGGTGT CATCTTCGCT
CCCGAATCTC CTTGGTGGTT GATTCGACAC GGCCGACTGG AAGAAGCGAA GAAGTCTCTG
ATGCGCCTTG CCTCCCCGAA ACGCAATGTC TCTTATGACG TTGATGAGAC TGCCGACATG
ATCCGTCACA CTACTGAACT CGAAAAGGAC ATTACTTCCG GTGCTTCTTT CTTGGACTGC
TTCAGGGGTG TGGACCTCCG TCGTACTGAA ATTGTTTGCG CCATCTGGAG TATGCAGAAC
CTTTCAGGTA ACACTTTCAG TAACTACGTA AGTACAGCCT TACTTAAATT AGAATATCAC
TAATTATCGA GCAGAGTACC TACTTCTTTG AGCAAGCTGG TCTCACGGGT ACTGTCCCTT
ACGATTTCGC TATGGGACAG TACGCAATCA ACATGGTCGG TGTCTTTGGC GCCTGGAGTC
TTATGGCCCT TGGGTTCGGT CGAAGGCAGC TTATCCTCAT TGGTCTATCT GGTCTCTTTG
TCGCTCTCTT GATCATGGGC TTCATGGGCT TGATCCCGGA TTCTAAGCAA AGGGAAGCTG
GTTTGGCTAC TGGTTCTCTC ATGTTGGTCT GGGCTATCTT CTACCAGTGC ACTGTAGGGT
AAGTTACCGT TTTTTCACTT TTCACGAACA GTTCTAACAG GGTGCTTTGC AGTACCGTTG
CTTATTCCTT GGTCGGTGAA ATTGCTTCTC GACGACTCTC GATCAAGACC GTCGCTCTCG
GGCGTGCTGC CTACAACGTT ATTGCCATCA TCTGCAATGT CCTTACTCCT TACATGATCA
ACCCTACCGC TTGGAACTGG GGCAACTACG CTGGTTTCTT CTGGGCCGGT TCTTGTTTCC
TCTGTCTTAT CTACGCATAC TTCCGTGTAC CGGAACCTTC CGGCCGAACC TATGCGGAGG
TTAGTTCTTT CTTCACATGA TGATGCTGAA GCGAGGGAAA CAAAATGCTG ATGCGCCCCG
TTACAGCTTG ACTTGCTCTT TGAGCGCAAG ATCTCTGCTC GCAAGTTCGC CAGCACCCAT
GTCAACGCTT TCGATGTCGC CCTTCACCAC CAGGTCGGTG AAGACAAGGG CGTCTCTGAC
CACGTCGAGA AGGCCTAAAT TTGTCAAATT ATCTTCTAAA GGAGATGGGA AAAGCGTTTA
GCATCTTGTT GGCAACAAAG AGTACCATCT TCTATATACA AGTTTTATAA CTCTAGGATC
TTATAGATCT GTTTTATGAT AAGGAATCCG GGTTTAAGAA TCGTTTCATC TTTTTGTTAG
GTTGTGTCTT CATAAATGTA ATAGAATTAT ATTAGATCTC GGTGGATATA TGTCGGCAGC
AGTTATGCAT AAATGCTCAT GC
|
|---|
| Protein sequence | MAGEDLAITS TSVENVPNSP SRKVSEDGLL LQEDKEMAAM YANAAAATEK EQNMTLLEGL
RLYPKAIAWS ILISSCCAME GYDISLLGNF YAFDPFNRKF GVELDDGTWQ VPARWQTGLS
NGAQCGQIIG LIVNGIFTER YGYRKVLIAS LLWLAAVITI FFCAPNIQVL LAGEILAGIP
WGVFQSIAIS YASDVCPIAL RGYLTCYANF CWGWGQLIGV GVIRAMFSRD DQWAYRIPYA
VQWVWPPLIL AGVIFAPESP WWLIRHGRLE EAKKSLMRLA SPKRNVSYDV DETADMIRHT
TELEKDITSG ASFLDCFRGV DLRRTEIVCA IWSMQNLSGN TFSNYSTYFF EQAGLTGTVP
YDFAMGQYAI NMVGVFGAWS LMALGFGRRQ LILIGLSGLF VALLIMGFMG LIPDSKQREA
GLATGSLMLV WAIFYQCTVG TVAYSLVGEI ASRRLSIKTV ALGRAAYNVI AIICNVLTPY
MINPTAWNWG NYAGFFWAGS CFLCLIYAYF RVPEPSGRTY AELDLLFERK ISARKFASTH
VNAFDVALHH QVGEDKGVSD HVEKA
|
|---|
| |