| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI03270 |
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| Symbol | |
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| ID | 3259761 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | - |
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| Start bp | 884071 |
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| End bp | 887075 |
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| Gene Length | 3005 bp |
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| Protein Length | 637 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 638258819 |
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| Product | succinate dehydrogenase flavoprotein subunit precursor, putative |
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| Protein accession | XP_572631 |
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| Protein GI | 58270950 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.164361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAATCCCAGT CAGCACTCCC CCTCTCCCCC GCTCACCACT CACCATGCTC GCCCTCTCTC
GTACAAGGGC CCTCGCCCGC CCCCTCCGCA ACAACTTCGC AAGGAACTAT GTCGTCGCTT
CCCAGACAGC CCGCGCTACA GAAGCTCCCG TAAGTCATGC CCAAAACATC GATTGACAGC
ACCCGTCTCC TCCGCCACTT ACTGGCGCTG GGAAACGGCG GGAGATAGCA TGGAAGGAAA
AAGGAAGCGC AAGGAAAGCA GGAAGAACGA TGTAGCTCAC GCGGAAAGTA GAACTTCGGC
CAGAAAAAGG GATACCCAAT CATCGACCAC GAGTTTGACG CTGTAGTTGT GTAAGTCGTT
TCCCGTCGTC TTCACGGCCA CCTTACGTGC AAGTCGGGGT TGGAAGGCTG ACAGGTGATT
AGCGGTGCTG GTGGTGCCGG TTTGCGAGCT GCTTTCGGTC TTGGTGAGTG ACTCTCTCCT
GTCGATGGAA AAAGTTTGAA GCCCGCAAAC GTGATGCGGT CAACGGATGT GTCCGTGGTG
TAACCTTGAA CTAGTTGTTG TGGATTTAGA GAGACGGATT GGGTTCCTCT GGGCATCAGG
CGATCGTGAT TGCAACATGT GCATAATTCA CAACTCTGCT CAAAAACTCC CCATAAATCT
CGGTTGCAGC CTGGGCAAAT CGTTTCGACT TGCGGAGAGA CATTGATTAC ATGACCTTAC
TAACTTCATT CTCACAGCCG AGGGTGGACT CAAGACCGCC TGTATCACCA AGCTTTTCCC
CACTCGATCC CACACTGTCG CCGCTCAGGG TGGTGTCAAC GCTGCTCTCG GTAACATGAC
GGAGGACGAC TGGAGATGGC ACATGTACGA CACTGTCAAG GGTTCTGATT GGTTAGGTGA
CCAGGATGCT ATCCACTACA TGTGTAGGGA GGCCCCTCAC ACTGTTATCG AAGTGAGTTT
CTAGGCGATG TTAGCAGCAA AAGATCTTGC TAAACTGCTC GTAGCTTGAA CACTACGGTG
TGCCCTTCTC CCGGACCAAG GAGGGCAAGA TCTACCAGCG AGCTTTCGGT GGTCAGTCTC
TCAAGTACGG TAAGGGTGGT CAGGCCTACC GATGTGCTGC CGCCGCCGAC CGAACTGGTC
ACGCCATTCT CCACACCTTG TACGGTCAAT CTCTCCGACA TAATACCAAC TTCTTCATCG
AGTACTTTGC TCTCGACCTT CTCATGCAGG ATGGCGAGTG TGTTGGTGTG CTTGCTATTA
ACATGGAGGA CGGTACCCTA CACAGATTCC GAAGCCACAA GACTGTCTTG GCTACAGGTG
GTTACGGCCG AGCGTATTTC TCCTGTACTT CTGCCCACAC CTGTTCCGGT GACGGTAACG
CGATGGCCGT GAGGGCTGGT TTGCCTTTGC AAGATTTGGA GTTTGTTCAG TTCCACCCTA
CTGGTATTTA CGGCGCAGGT TGTCTTATCA CTGAGGGTAA GTTAAAGTCT TGACAACAAT
CTTGTACAAT GTTCTAACAT CAGATAGGTT CTCGAGGTGA GGGTGGTTAC CTCGTCAACT
CTGAGGGTGA GCGATTCATG GAGCGATACG CCCCCACCGC CAAGGACCTT GCTTCTCGAG
ATGTCGTCTC CCGATCCATG ACCCTCGAAA TCCGAGAAGG TCGAGGTGTC GGCCCCGAGA
AGGACCACAT CTTCCTCCAA CTCAGTCACT TGCCTGCCGA AGTCTTGCAC GAACGATTGC
CTGGTATCTC TGAGACCGCT GCTATCTTTG CCGGTGTCGA TGTTACCAAG GAGCCTATCC
CAGTTTTGCC TACTGTCCAT TATAAGTGAG CCATCCCTTT TGAACGCCCT TGGAATTCAC
TGACAAGGCC CACAGCATGG GCGGTATTCC CACTAAATAC ACCGGCGAAG TCCTCACCAT
CGATGAGCAA GGCAACGACA AGGTCGTTCC CGGTCTTTAT GCCGCCGGCG AAGCCGCCTG
TGTCTCTGTC CACGGTGCTA ACCGACTCGG TGCCAACTCC TTGCTCGACA TTGTCGTCTT
TGGCCGTGCT TGCGCAAACC ACATTAAAGA AACTCTTGCC CCCAACACTC CTCATAAGCC
TATGAACCCC GAGCTTGGCA AGGAGTCTAT TGAGGATCTT GACAAGATTA GGAATGCTAG
CGGTCCTTTG CCTACTTCCC AGATCAGGTT GAACATGCAG AAGACAATGC AGACCGACGC
CGCCGTCTTC CGGTAAGTAG CTGTGCCTTC CTGAGGAAAT AGCGCAGTCG CTGACAAGTC
TTTATAGAAC TCAACAATCT TTGGACGAGG GTGTTGCTAA GATGAGGGAA GTCTACAAGT
CTTACGACCA GGTCGGTATC AAGGACAGGA GTATGATCTG GAACTCGTGC GTCATCTTCC
ATCTGCTATT CTCACATCAC ATGTACTAAT AGTTTGAACA GCGACCTCAT TGAGACCCTC
GAGCTTAGGA ACATTATGCA GAACGCCATG CAGACTGTCG TTTCAGCTGC TGCTAGGAAG
GAGTCTCGAG GTGCCCACGC CCGAGAGGAC TACCCCGAGC GTAACGAGTG AGTCACGTTG
ATCTCAGTAG CTCTATTGCA AGCCCATGCT AATATATAAT CTCTAGCGAG GAGTGGATGA
AGCACACCCT TTCCTTCCAG CATGATCCCA ACTCCCCCGA CGTCGAGCTC AAATACCGAG
GCGTTATTGC CAACACTCTT GACGAGGCTG AGTGCAAGCC CGTTCCTCCT TTCAAGCGAA
CTTATTAAAT GCAGTCTTCG GGAAGAATAT GGGAAGAAAG GAAAAGGAAT GATCGGGGAG
AAGTGTTGCA ACTGGCGAAA GGTGTGGAGA GAAAAACAGG GAGAGGAGGG AGACATGGAG
GATGGGGTGT ATAGGGTCTG GGAAGAGGGT AGACGGTTTT TTTATTGGTA CCCACTATTT
CAGATGGGGA CATGTACGCT ATACGGATAC GATGGATATC GGGTACATGC ATGAGCATTT
TAAGG
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| Protein sequence | MLALSRTRAL ARPLRNNFAR NYVVASQTAR ATEAPNFGQK KGYPIIDHEF DAVVVGAGGA
GLRAAFGLAE GGLKTACITK LFPTRSHTVA AQGGVNAALG NMTEDDWRWH MYDTVKGSDW
LGDQDAIHYM CREAPHTVIE LEHYGVPFSR TKEGKIYQRA FGGQSLKYGK GGQAYRCAAA
ADRTGHAILH TLYGQSLRHN TNFFIEYFAL DLLMQDGECV GVLAINMEDG TLHRFRSHKT
VLATGGYGRA YFSCTSAHTC SGDGNAMAVR AGLPLQDLEF VQFHPTGIYG AGCLITEGSR
GEGGYLVNSE GERFMERYAP TAKDLASRDV VSRSMTLEIR EGRGVGPEKD HIFLQLSHLP
AEVLHERLPG ISETAAIFAG VDVTKEPIPV LPTVHYNMGG IPTKYTGEVL TIDEQGNDKV
VPGLYAAGEA ACVSVHGANR LGANSLLDIV VFGRACANHI KETLAPNTPH KPMNPELGKE
SIEDLDKIRN ASGPLPTSQI RLNMQKTMQT DAAVFRTQQS LDEGVAKMRE VYKSYDQVGI
KDRSMIWNSD LIETLELRNI MQNAMQTVVS AAARKESRGA HAREDYPERN DEEWMKHTLS
FQHDPNSPDV ELKYRGVIAN TLDEAECKPV PPFKRTY
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