Gene CNI02720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI02720 
Symbol 
ID3259504 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp732998 
End bp734379 
Gene Length1382 bp 
Protein Length342 aa 
Translation table 
GC content47% 
IMG OID638258763 
Productnuclear mRNA splicing, via spliceosome-related protein, putative 
Protein accessionXP_572680 
Protein GI58271048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCAG ACAATACTGT AGCGCCAAAA AGGAAGCTCA AGCCTGCTCG GAAGCAAGTG 
GCGTCGGATG AGGTGGACAA GAGTCAAGGT TACCAAGCGG GACGAGAATA CAGTGGGTCA
CTTTGTGTTC GTCCGGGATT TTTTTGCTGA CTTTTTTCAA GACATTTGGT ATAACAAATG
GGCAGGAGGT GACAGAGAGG ACGCTTTAGC TAGGTGCATC TATCGTCAAA CCACATTCAT
GCGAAGCTGA ATGTCTACGA TGATAGCAAA GTGCACTCTC AAACCCGATG TATCATCTCT
CGAGATGCAG GCTACACAAG AGCAGATGCC ACCGGTAACA AGTACTGCTG TTTGTTTTTT
GCTCGTGGAT GTTGTCCTTA CGGGTGAGTA CAATTCCAAT ATGATCAGCT TCAGCTCAAA
CTGTAGCTCA CCTTGACTGC AGATATGAAT GCCAGTATCT CCACCGTTTA CCATTACCGA
GCCGTAAGTC GCCTGTGACA CCATTCTTTG CAAGGATCTG AGCATCGTCT TCCTAGATCA
GTTACCGGAC AACTCTAGAG ACTGTTTTGG ACGGGAGAAG CACGCCGACT ACCGAGATGA
CATGGGTGGT GTCGGATCTT TCAACCGTCA AAACCGAACA TTGTACATTG GCAAAATCCA
AGAAAGCCCG GATAAGAAGC AGATGACGGA GACTTTGTTG CGTCATTTCG GAGAATGGGG
TAAGATTGTC AAATGTGAGT GTGTTTTGAT CCTTAGGCCT CGCTTCAAAG CTAATAGCAT
TACGCAGATA ATATCCTGTT TGGACGTGGT GTCGCGTTTG TGACATACGA GACTGATCAC
CAAGCGAGCT TTGCCAAGGA GGCTATGGCG AACCAAAGTA TGGATGGTGA CGAGATCTTG
AACGTTCGGT AAGCTCGTTT CTGTTCCACA ACTCGTGGAC TTAACTCACA TTTTGATACT
TTTTCCAGAT GGGCTACTGA AGATCCCAAT CCAGGAGAGA AGGTTGCCGA GGAAAAACGT
ATTGAAGAAA TTGGACAAAA GGCCATCGCC GGCATGCTCG ACGAAAATTT AGTCGAAGCT
ACTCAAGCTG TTCGAGCCCT TGAAGACGGT GACGTTGAGG ATTTCTACCA TATAGAAACA
TCAAAACCTG AAGAAGAGGA GGAGAACAGA CCAGCGAAGA AAGGGAAAAG CGAAGGTGGA
TTTTTCAATG CGGACGCTCT GGACAACATC AAATTCTACG CTGAACTGGC GAAGAAACAG
GCTGAAGAGG AGAAGGAAAA GGCTAGAAAA GTACCGGCAA AGCAAGTGGG GATGTCTTTG
CTCGGAGGAT ACGGAAGCGG CGATGAGAGT GACTAAAATC TTTAGGGTCA TGTTTGTTTT
TG
 
Protein sequence
MSSDNTVAPK RKLKPARKQV ASDEVDKSQG YQAGREYNIW YNKWAGGDRE DALASKVHSQ 
TRCIISRDAG YTRADATGNK YCCLFFARGC CPYGYECQYL HRLPLPSHQL PDNSRDCFGR
EKHADYRDDM GGVGSFNRQN RTLYIGKIQE SPDKKQMTET LLRHFGEWGK IVKYNILFGR
GVAFVTYETD HQASFAKEAM ANQSMDGDEI LNVRWATEDP NPGEKVAEEK RIEEIGQKAI
AGMLDENLVE ATQAVRALED GDVEDFYHIE TSKPEEEEEN RPAKKGKSEG GFFNADALDN
IKFYAELAKK QAEEEKEKAR KVPAKQVGMS LLGGYGSGDE SD