Gene CNI01980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI01980 
Symbol 
ID3259391 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp545898 
End bp547529 
Gene Length1632 bp 
Protein Length462 aa 
Translation table 
GC content50% 
IMG OID638258684 
Productzinc-finger protein, putative 
Protein accessionXP_572828 
Protein GI58271344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.925547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTAAATACAA CTCATTAATC ATCTCCTCCA GCTTCCTAAC GGCTCTTACA ATGGCCTCGG 
CAACATCCTC CCTTCCCCCA ACGTCCCCTC CAGCATCGAC CCATACAATG GAACCGTCTC
AGCCACAGTC ATCACCTCTG AAAGCCCCAT CTATCATCGT CTCCCCGTCC AAAAATCCCG
TTATGGAACG CGTCGCCTCT CAACAACTAA ACTCATCACC AGGACCTCAA TGGGCAACAG
AAAACAACCC GCACCCGAAA GCGGGAGGGA GTTATACGGG TGTCTCACCT GCTCCAAGTG
TGGATGGACA CGTCGATGTG GATGAGGAGA TTGATGAGTT ATTGGGAGAT GACGATGTGC
AAGAAGGCGC AGAGGAGAAA AATGGAGAGC CGGAGAAGCA GAAATGTCAG TGGGGGGAAT
GTCAAGGTGA TTTCGACTCC AAGCAAGAAT TTTATGGGCA CGTTAAAGGT GAGTGCTGTG
GATTACAATG TATACGGGTA GAAGTCCTGA TCTCACGACC AAAGACCACA TCAATGCTTC
CAAGGAGTAT GCATGTGAAT GGCGGACTTG CAGTCGTGTT GGACACAAGC AAGGCCGATC
ATTGCTGTTG ACCCATATCC GAGGCCATAC GGGCGAAAGG CCATACAGCT GTACGATACC
TGGTACGTCT TTGGGTATCA TTCCACTTTT GCGTCTCGTT GCTGATTTCC CGCGATATAG
GATGTAACAA AGCATTCGCA CGTACAGACG CCCTCAATAA GCACAAGCGT ACAGTACACG
CTGATGTCAC AAACCCCAAT GGTGCCAAAC CCTCTAAAGG TGGAAAGGGG AAAACCAAGG
CTACACCTGG GACCGGTAAG GGTAAGGGTA AAACCAAAGG TGTTGCTCCC GTTCCTTCTG
ATATCCCCAC ACCTACTCCC GCCATCACCT CCAAACCTAA ATCAAAGTCT CTACCTCCAC
CACTTATCCT TTCACCATCG CCTCCTATAC CTCCCGTTTC AGCGCCTGAC GAGGATTTGA
TACTGGATCC CGAACTGGCG GAGCTTATCC CTCGTCTTCG GTCCCGATGG CCTATTATTC
CAGAAGGGAA CGATGAGATC GAAGCTCTGA GGGAGGCTAG GCGAAGATTC CCGAGGCACC
GTCTATTCCC CAATTATACC AAGGAAGAAG ACGTCGAGGA AAAAGGGAGT CGAGTCGGGC
TGGAAGAACT AGTAGCCGAT CCTCTTGATG ACCCCGTTGC AAGGCCTTTA CGACGGAATG
GTGAAGACGA AATTGAATAC AGGGAAAGAG TGCGAGAGTA TCTGACAGAC ACATCAAGAC
CCCCTGATGC GGACCTTCCG ATGGAGGAAC TAGATTATAC CCTGCCGCCT CTTGTCCCAG
AAATTGCACA CACAACGGAA GATCCTGAAG ATCCCGAAGG CGAGGTGGTA GATGTCCTGG
GCAGAAGCCG CTGGCAAGTT AGATATATTA TGGCAAAAGC GAGACTTTTG CTGCTGGAGG
AAGAGAACAT GTTGAGGCGA AGATATCTGC AGGAACTGGC AGAGACTCGA TAAACCTATC
AATCACTCAT ACAAAAAGGT ATAGCGGACT TCCACTGTTA TCTTGATGTA CTTGCAACAA
CAATTATATC TG
 
Protein sequence
MASATSSLPP TSPPASTHTM EPSQPQSSPL KAPSIIVSPS KNPVMERVAS QQLNSSPGPQ 
WATENNPHPK AGGSYTGVSP APSVDGHVDV DEEIDELLGD DDVQEGAEEK NGEPEKQKCQ
WGECQGDFDS KQEFYGHVKD HINASKEYAC EWRTCSRVGH KQGRSLLLTH IRGHTGERPY
SCTIPGCNKA FARTDALNKH KRTVHADVTN PNGAKPSKGG KGKTKATPGT GKGKGKTKGV
APVPSDIPTP TPAITSKPKS KSLPPPLILS PSPPIPPVSA PDEDLILDPE LAELIPRLRS
RWPIIPEGND EIEALREARR RFPRHRLFPN YTKEEDVEEK GSRVGLEELV ADPLDDPVAR
PLRRNGEDEI EYRERVREYL TDTSRPPDAD LPMEELDYTL PPLVPEIAHT TEDPEDPEGE
VVDVLGRSRW QVRYIMAKAR LLLLEEENML RRRYLQELAE TR