Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI01980 |
Symbol | |
ID | 3259391 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 545898 |
End bp | 547529 |
Gene Length | 1632 bp |
Protein Length | 462 aa |
Translation table | |
GC content | 50% |
IMG OID | 638258684 |
Product | zinc-finger protein, putative |
Protein accession | XP_572828 |
Protein GI | 58271344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.925547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTAAATACAA CTCATTAATC ATCTCCTCCA GCTTCCTAAC GGCTCTTACA ATGGCCTCGG CAACATCCTC CCTTCCCCCA ACGTCCCCTC CAGCATCGAC CCATACAATG GAACCGTCTC AGCCACAGTC ATCACCTCTG AAAGCCCCAT CTATCATCGT CTCCCCGTCC AAAAATCCCG TTATGGAACG CGTCGCCTCT CAACAACTAA ACTCATCACC AGGACCTCAA TGGGCAACAG AAAACAACCC GCACCCGAAA GCGGGAGGGA GTTATACGGG TGTCTCACCT GCTCCAAGTG TGGATGGACA CGTCGATGTG GATGAGGAGA TTGATGAGTT ATTGGGAGAT GACGATGTGC AAGAAGGCGC AGAGGAGAAA AATGGAGAGC CGGAGAAGCA GAAATGTCAG TGGGGGGAAT GTCAAGGTGA TTTCGACTCC AAGCAAGAAT TTTATGGGCA CGTTAAAGGT GAGTGCTGTG GATTACAATG TATACGGGTA GAAGTCCTGA TCTCACGACC AAAGACCACA TCAATGCTTC CAAGGAGTAT GCATGTGAAT GGCGGACTTG CAGTCGTGTT GGACACAAGC AAGGCCGATC ATTGCTGTTG ACCCATATCC GAGGCCATAC GGGCGAAAGG CCATACAGCT GTACGATACC TGGTACGTCT TTGGGTATCA TTCCACTTTT GCGTCTCGTT GCTGATTTCC CGCGATATAG GATGTAACAA AGCATTCGCA CGTACAGACG CCCTCAATAA GCACAAGCGT ACAGTACACG CTGATGTCAC AAACCCCAAT GGTGCCAAAC CCTCTAAAGG TGGAAAGGGG AAAACCAAGG CTACACCTGG GACCGGTAAG GGTAAGGGTA AAACCAAAGG TGTTGCTCCC GTTCCTTCTG ATATCCCCAC ACCTACTCCC GCCATCACCT CCAAACCTAA ATCAAAGTCT CTACCTCCAC CACTTATCCT TTCACCATCG CCTCCTATAC CTCCCGTTTC AGCGCCTGAC GAGGATTTGA TACTGGATCC CGAACTGGCG GAGCTTATCC CTCGTCTTCG GTCCCGATGG CCTATTATTC CAGAAGGGAA CGATGAGATC GAAGCTCTGA GGGAGGCTAG GCGAAGATTC CCGAGGCACC GTCTATTCCC CAATTATACC AAGGAAGAAG ACGTCGAGGA AAAAGGGAGT CGAGTCGGGC TGGAAGAACT AGTAGCCGAT CCTCTTGATG ACCCCGTTGC AAGGCCTTTA CGACGGAATG GTGAAGACGA AATTGAATAC AGGGAAAGAG TGCGAGAGTA TCTGACAGAC ACATCAAGAC CCCCTGATGC GGACCTTCCG ATGGAGGAAC TAGATTATAC CCTGCCGCCT CTTGTCCCAG AAATTGCACA CACAACGGAA GATCCTGAAG ATCCCGAAGG CGAGGTGGTA GATGTCCTGG GCAGAAGCCG CTGGCAAGTT AGATATATTA TGGCAAAAGC GAGACTTTTG CTGCTGGAGG AAGAGAACAT GTTGAGGCGA AGATATCTGC AGGAACTGGC AGAGACTCGA TAAACCTATC AATCACTCAT ACAAAAAGGT ATAGCGGACT TCCACTGTTA TCTTGATGTA CTTGCAACAA CAATTATATC TG
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Protein sequence | MASATSSLPP TSPPASTHTM EPSQPQSSPL KAPSIIVSPS KNPVMERVAS QQLNSSPGPQ WATENNPHPK AGGSYTGVSP APSVDGHVDV DEEIDELLGD DDVQEGAEEK NGEPEKQKCQ WGECQGDFDS KQEFYGHVKD HINASKEYAC EWRTCSRVGH KQGRSLLLTH IRGHTGERPY SCTIPGCNKA FARTDALNKH KRTVHADVTN PNGAKPSKGG KGKTKATPGT GKGKGKTKGV APVPSDIPTP TPAITSKPKS KSLPPPLILS PSPPIPPVSA PDEDLILDPE LAELIPRLRS RWPIIPEGND EIEALREARR RFPRHRLFPN YTKEEDVEEK GSRVGLEELV ADPLDDPVAR PLRRNGEDEI EYRERVREYL TDTSRPPDAD LPMEELDYTL PPLVPEIAHT TEDPEDPEGE VVDVLGRSRW QVRYIMAKAR LLLLEEENML RRRYLQELAE TR
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