| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI01880 |
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| Symbol | |
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| ID | 3259615 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | - |
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| Start bp | 519496 |
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| End bp | 521881 |
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| Gene Length | 2386 bp |
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| Protein Length | 546 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638258673 |
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| Product | ATP-dependent RNA helicase, putative |
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| Protein accession | XP_572663 |
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| Protein GI | 58271014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCTGTATTTC TCGTTATCTC TCCACTGGCA CCATATTGCG ACTGCAGTAC AGCACAGTAA
CTTGCCGATT CTTGCCTGCT TTATTACCTA ATATTGCCAT CATTACTTGA TTCCACACCG
ACGATCACAA CAAAATGAGC GACGCACAGG CCCCTCCTGC CTCGACCTCG TGGGCCGATA
TGGTTGACGA GGATGAAAAA CAAAAACGTC CGTATCCCAA ACCTATTAGA TCTTGTCAAA
ATTTGTTCCT TTTTAACTGA CATTTCATTC ATTGGTTGCC CTGTGGTCGC TCTTCCTCCG
ATCTTGCCTC TTCACCCTAC CCCTGTCATC TTTATTTACA ATCTCCGTAC AAAAACAGAG
GAACAAAACA TGAGCAACCA GAACGACGGT AAGCTTTGCC TGTAGCATAG TTTTTGCAAC
TGAGCTAACG TTATAACAGG ATGGGGAGAG ACTGCGACAG AGACCAGTGC CCCTGCTCCT
CCTCCTGCTT CCGCACCCGT CAGCAGCAGT AACAACGACG GCTGGGGTGA ACCGGCGCCT
AGTGCTCCCG CAGACAACGG GTGGGCCGAC GCTGGAGCTT CCAACGGCGG TAGCGGTGCG
AACAACAACG ACGGATGGTT CGATGCTCCT GTACCTCCGT CTTCTCAACC TCCAAAGAAG
GAGGCTTCCG ACATCCAACT GCAAGACGAC ACTGAAGGTT TGATTACTAA CACCTTCCAG
GTCGAGGTGA GTAACCTAAT TCCTGCAACC ATTGTATGGC TGATTCGATA CACCAGGTCA
AACTTGCCGA TCTCCAAGGC GACCCCAACT CTCCTCTTTA CTCTGTCCAG TCTTTCAAGG
AGCTTAATCT GTGAATTGAC CAATGATTTT TTTTATCCGG CGTCCAAGCT AATTATTTTG
GTAGTCACGA AGATCTCATG AAGGGTATCA TTGCCGCTGG TTTCCAAAAA CCTTCCAAGA
TTCAAGAGAA GGCTCTTCCT TTGCTCCTCT CCAATCCGTA AGTATATCGG TTTTGCGTAC
GAAACATTAC TAACCATTGG TTTTAGCCCT CGAAACCTCA TCGGGCAAAG TCAGTCTGGT
ACTGGTAAGA CTGCTGCCTT CACCCTCAAC ATGTTGAGCC GAGTCGATCC TACCATCCCC
ACCCCTCAAG TGGGTTCTTT TTTCTAGTTC CTTGGCCTTA TTATCGGCAG CTGACATTGA
TCTTTAGGCC ATCTGTATCG CTCCTTCCCG AGAACTTGCC CGTCAGATTC AAGAAGTTAT
CGACCAAATC GGTCAATTCA CTCAAGTCGG CACTTTCCTT GCCATCCCTG GCTCTTGGTC
TCGTAATTCC CGAATCGACA AGCAGATCCT CATCGGTACC CCTGGTACCC TTGTGGATAT
GTTGATGAGG GGCTCAAGAA TTTTGGATCC TAGGATGATT AGGGTGTTGG TTCTTGACGA
GGCTGACGAG TTGATCGCCC AGCAAGGTTT GGGTGAACAG ACTTTCAGGA TCAAGCAGTA
CGTCTTGTTG ATATATTGCT CAATGCCATA TGCTGATGCT CGAACTAGAC TCCTTCCTCC
CAACGTCCAA AATGTCCTTT TCTCTGCTAC TTTCAACGAT GACGTTCAAG AGTTCGCCGA
CCGATTCGCT CCCGAAGCCA ACAAGATTTT CTTGAGGAAG GAAGATATTA CTGTTGATGC
GATCAGGCAG CTTTACCTTG AATGTGACAG CGAGGATCAG AAGTATGAAG CCTTGTCTGC
CCTATACGAC TGCTTGGTCA TCGGACAAAG TATCGTCTTC TGCAAGGTTA GTCCATGTCT
TTACCTTGTT TGACGTAGCT GACATCCTTG TAGCGAAAAG TCACCGCCGA CCACATTGCT
GAACGTCTTA TTTCCGAAGG TCATGCCGTT GCCTCTCTCC ACGGTGACAA GCTCTCCCAA
GAACGTGATG CTATCCTCGA CGGCTTCAGG AATGGTGAGA CCAAGGTTCT CATCACTACC
AACGTTATTG CTCGAGGTAT CGATATCCCT GCTGTGAACA TGGTCGTTAA CTATGACGTG
CCCGACCTGG GACCTGGCGG TAATGGTCCG GACATCGAGA CCTACATCCA CCGTATCGGT
GAGTGATCCG GGTTGCTGCA TTCTAGGACG TGTATACTGA TAGAATACAT AGGTCGAACT
GGTCGATTCG GCCGAAAGGG TTGTTCTGTC ATCTTCACCC ACGACTACCG ATCCAAGTCC
GACGTTGAGC GGATCATGAA CACTCTCGGA AAGCCTATGA AGAAGATTGA TGCCAGGAGT
ACGACAGATA TCGAGCAGTT GGAGAAGGCT TTGAAGTTGG CTATGAAGGG ACCGGCGTAA
TTATATTAGA GTTTCGTAAA ATAAACCTGA GGTATGGTTA TGGCAT
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| Protein sequence | MSDAQAPPAS TSWADMVDED EKQKQEQNMS NQNDGWGETA TETSAPAPPP ASAPVSSSNN
DGWGEPAPSA PADNGWADAG ASNGGSGANN NDGWFDAPVP PSSQPPKKEA SDIQLQDDTE
GLITNTFQVE VKLADLQGDP NSPLYSVQSF KELNLHEDLM KGIIAAGFQK PSKIQEKALP
LLLSNPPRNL IGQSQSGTGK TAAFTLNMLS RVDPTIPTPQ AICIAPSREL ARQIQEVIDQ
IGQFTQVGTF LAIPGSWSRN SRIDKQILIG TPGTLVDMLM RGSRILDPRM IRVLVLDEAD
ELIAQQGLGE QTFRIKQLLP PNVQNVLFSA TFNDDVQEFA DRFAPEANKI FLRKEDITVD
AIRQLYLECD SEDQKYEALS ALYDCLVIGQ SIVFCKRKVT ADHIAERLIS EGHAVASLHG
DKLSQERDAI LDGFRNGETK VLITTNVIAR GIDIPAVNMV VNYDVPDLGP GGNGPDIETY
IHRIGRTGRF GRKGCSVIFT HDYRSKSDVE RIMNTLGKPM KKIDARSTTD IEQLEKALKL
AMKGPA
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