Gene CNI01780 details

Gene Information

• Locus tag: CNI01780
• ID: 3259535
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: +
• Start bp: 493959
• End bp: 496078
• Gene Length: 2120 bp
• Protein Length: 550 aa
• GC content: 50%
• IMG OID: 638258662
• Product: conserved hypothetical protein
• Protein accession: XP_572822
• Protein GI: 58271332

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0761011
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGCAACTGCA TCTTCATTCT TTTATCTTTC CACTCAATCA TAACTCCTGC TCTACCAAAC 
GTTACACCCC GAGCTATGAG GGATCCCAGG TAGAGTCACA GGATAACCCA CCAATTATGC 
AGCTCGGCCG CTACTCTGTC TCCACCCTCC TTCCGCCTCC TATCCATTCA ATCACTTTCT 
CTCCGGATGG ACGTTTCTTT GCAGTCGCAG CAGAGAAGGG CTACGAGATA TGGAAGACCT 
GGCCTTTAGG TCTGGTTAGA CGGAGAGGTT AGTTGAATAA TCGTCTCCTT CGTGTTGTAA 
TGTCGCCAGT GGCGAGGCTG TGTGGGATAA AAGGGCGCCG AACGATCACT GATCTTCGTT 
CGTAGTCCTC CCTGGAACTC TTGCTCTAGC GGTGATCCTT CCCCACGCAC CATTATTAGT 
TCTTCAAGCA GGAGGGACGG CACCCCTCTA TGCACCCAAC AAAATAGTAA TTTACAATGA 
CAAGCTTGGG GAGGTCGTTG CGGAAGTCGA GTTTGGGTGC GTCACTAATA CTAATGTCTG 
AAAGCGCAAA TAGGCGATTC GCTGATTTCC ATCTTTTAGT GAACGAATAC GTGGAGTAGT 
AGCTCGACGA GGAATGATCT GTGTCGCTCT TCTCAGAAAA GTTGTTGGAT TTGAATACGG 
CTTGGGCTCA GATGATGCAG GCAAGGGTAA AAGCAAAATG ATGGACAGCA ACAGCAATGG 
ATTCTGGATC AAAAAAATTG GCGAGTGGGA AACTGCCAAG AATGAACAAG GTAAGTGGTA 
TGATGAAGTT GACTCGACTA ATACTGATGA TGTGAAAAGG CCTTATGGCG ATGGCCACTG 
CACCAGGATC TACACTGTTA ACCCTCCCAG GCCGTCAGCC TGGCCATGTC CAGCTGGTCC 
CACTTCCCCC GTGTCCATCT TCTTCCTCTC CTGGTTCGCC TACTCGTACA TCGGTTACAT 
CTCAGACGAC TTTCCGATCC CCGATCATCC TTGCTCATAC TCACCCCCTT TCAACATTAG 
GCATCAGCCC CTCAGGATCT CACATCGTTA CCACTTCTGA GCGGGGCACC TTGCTTCGAA 
TATGGGATAC ATCAAGGGGA AGGCTGGAAA GGGAACTGCG GAGAGGTGTT GATCCAGCTG 
AGATGTGGGG TGCCACTTTT GAGCGAGATG GGAAGGGTGC AAGAGTAGCA GGATGGAGTG 
ACAAAGGAAC AATCCACGTA TGGGAAAGCG AGGAAAACAA GACAGGACAA AATGGAACGA 
GGCCGTAGGT CAAAATATAC CAAAGATCAA AACCTCATGC TGACTGTTTC TTCAGAGCAA 
CTCCATCAAA TGCTTCCTTA ACGAACATAC TCTCCCGCAA CCTCCCATTA CCCAAATACT 
TCTCTTCCAT CACATCTACG GCCCAGTATC GTCTTCCTCG CAAGAACCCT CATGCATTCA 
GTGCAGCTTT GGGGGCTGCT GGTGTACCTT CAATGGCCAT GAAAGAGGCT GTGGACTTGG 
AGGGCGAAAG AGGCGAAAGA TTCATTGTCG GATGGATCGA AGTAGACGTG GCCGTAGAAG 
ATCATAAAGT GGATGACAAG GATCGAGCCA AAGAAGACCC CAAAGCTCAA TACCGACCAT 
CATCTAATGT GTCGACAATG GGTAGCTTTC CTATTGGCAC TCGCGAGGAA CGTATGTCAT 
TTGGTTCAGA AGGCACGAGT CGCACAGCGA CCCCTTTCCA GCGGGTAGAA ACACCCACGC 
CAGGTGGGAC TAAGCTGGGT CGAGGACGAG GACGTATGTC TGGGGGTCCC CATGTGAGAC 
TAAAGGGCCA CTCTGCCCAG CGAACTTCCT CGAATACTCC CTCTCAGAAG CGGACGGAGA 
AACAAATGCA GCTGATAGCT ATCACTTATT CAGGTGATTG GTATCGACTG AAGATTCCCG 
AAGGTGCAGG ACGGGGCGAA GGCTCATCTG GCGGCGAGGA AGGAAAAACG AGTGCCAAAT 
GCGAATTGGT AGAGTACAGA CGGCTAGCAG TTGGGGGCGG AGGTTGGTAG TGATCGCTGT 
TCATTTTCGA ATTTTTGTCA TCATCACAGA ATGAACCATC CATATCATGT GTGCAGACAG 
TTGCATTGTT GTATATTTGA 

 

Protein sequence

MQLGRYSVST LLPPPIHSIT FSPDGRFFAV AAEKGYEIWK TWPLGLVRRR VLPGTLALAV 
ILPHAPLLVL QAGGTAPLYA PNKIVIYNDK LGEVVAEVEF GERIRGVVAR RGMICVALLR 
KVVGFEYGLG SDDAGKGKSK MMDSNSNGFW IKKIGEWETA KNEQGLMAMA TAPGSTLLTL 
PGRQPGHVQL VPLPPCPSSS SPGSPTRTSV TSQTTFRSPI ILAHTHPLST LGISPSGSHI 
VTTSERGTLL RIWDTSRGRL ERELRRGVDP AEMWGATFER DGKGARVAGW SDKGTIHVWE 
SEENKTGQNG TRPATPSNAS LTNILSRNLP LPKYFSSITS TAQYRLPRKN PHAFSAALGA 
AGVPSMAMKE AVDLEGERGE RFIVGWIEVD VAVEDHKVDD KDRAKEDPKA QYRPSSNVST 
MGSFPIGTRE ERMSFGSEGT SRTATPFQRV ETPTPGGTKL GRGRGRMSGG PHVRLKGHSA 
QRTSSNTPSQ KRTEKQMQLI AITYSGDWYR LKIPEGAGRG EGSSGGEEGK TSAKCELVEY 
RRLAVGGGGW