| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI01590 |
|---|
| Symbol | |
|---|
| ID | 3259583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | - |
|---|
| Start bp | 459414 |
|---|
| End bp | 460531 |
|---|
| Gene Length | 1118 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638258642 |
|---|
| Product | manganese superoxide dismutase, putative |
|---|
| Protein accession | XP_572672 |
|---|
| Protein GI | 58271032 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACAGTATCC CATACACCGG CACATCCCCT AAAATATTTC ACATACACTT TCACAGATCC
CATTTCCAAA ATGATCACTG CTATCACTCG AACCGCTCTT CCGCGAGCTA CTCTCCGCAC
TTCTCTTGCG ACCATGTCCA CCATTAGAGC CAAGCACACC CTCCCTCCTC TCCCTTACGC
CTATGATGTT TGTAAAATCT CTACCATGCA ATGAAGATCC AGCTAATACA CTCGGACGTA
GGCATTGGAG CCTTCCATCT CAGCTGAGAT TATGAATCTC CACCACACCA AGCACCACCA
GACTTACGTC AACGGTCTCA ACGCCGCTGA GGAGTCTCTC CAGAAGGCCT CTGCTGCTGG
CGACTTCAAG GCTGCTATTG CCCTTCAGCC TGCCCTCAAG TTCAACGGTG GTGGTCACAT
GTGAGTTGTG CGAAATTTCA TTGGCCGAGA TGGATGCTAA TTGTATTTTG AATGTTAGTA
ACCACTCTGT AAGTATCAAT AACAAATTCA CAGAGGCAGA CATATGGGCG CCCTCTAACA
TGATTTGCAG CTCTTCTGGA AGAACCTTGC TCCCACCGGC TCTGCTCAAG TCAAGGTTCC
CACCTCTGGT GTCTTCTACG ACCAGGTCCA GGCTGACTTT GGCGGCTTCG AGAACCTCAA
GAAGGAGATG AATGCCAAGA CTGCTGCCAT CCAAGGCTCT GGCTGGGGCT GGCTTGGCTA
TAACAAGGCC ACCAAGAAGC TCGAGATTGT CACTACTCCC AACCAGGACC CACTCTTGTG
TGAGTATAAC ATTCAAAATG ATTTTTTGGT TGAGTCACTG AAGATTACTT GCAGCTCACG
TTCCCATCAT CGGCATTGAC ATCTGGGAGC ACGCGTAAGT AACGCTGTTG ACCAAAACGT
CAAATTTTTT CACTAACGAA ACCACAGTTT CTATCTCCAG TACAAGAACG TCAAGCCCGA
CTATCTCAAT GCCATCTGGA ATGTTATCAA CTACGAGGAG GCCGAAAGTC GTCTCAAGGC
TGCTCAGTAA GCTTTATGAA CAATGTGTAA CAGAGAAGAA GCAGAAGTAG CAAGATCAAG
TCATAGTAAT TTGAATGCAT AATATCAGCG TTAAAACA
|
|---|
| Protein sequence | MITAITRTAL PRATLRTSLA TMSTIRAKHT LPPLPYAYDA LEPSISAEIM NLHHTKHHQT
YVNGLNAAEE SLQKASAAGD FKAAIALQPA LKFNGGGHIN HSLFWKNLAP TGSAQVKVPT
SGVFYDQVQA DFGGFENLKK EMNAKTAAIQ GSGWGWLGYN KATKKLEIVT TPNQDPLLSH
VPIIGIDIWE HAFYLQYKNV KPDYLNAIWN VINYEEAESR LKAAQ
|
|---|
| |