Gene CNI01550 details

Gene Information

• Locus tag: CNI01550
• ID: 3259712
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: +
• Start bp: 444720
• End bp: 451240
• Gene Length: 6521 bp
• Protein Length: 1770 aa
• GC content: 47%
• IMG OID: 638258638
• Product: RNA helicase, putative
• Protein accession: XP_572794
• Protein GI: 58271276
• COG category: [R] General function prediction only
• COG ID: [COG1204] Superfamily II helicase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTATTAC CTCGTCTTCC TTTCAGGTCC TTCGCTGCTT TTCGACAAAC AATCCCCGAG 
AAAGACGAGC ACAACAAGCA GCACAGATCT CCCAACCACC CGGGTTGACA TTAGCATCAC 
GCGTGTCCAT GTCTGTCCAA CATTACCTGG GCACTCTTTT CCAGCCCCAA CCTCCAACAT 
TTGAGGATAG TTGGAAAGCT GTTATTTCAA GCTGGGGCCC TTCTCAGTAA GTAATTAATG 
CACTTCCTCA CAACACATCT CTGATCATCT GTTCATTGTT AGGTTTCGTG CTCAAGCCAT 
CGATGACTTT GAACCAGTCT TGGAGACCTC ACCATGGCCT TCAGTTCTAA ACTATTTAAC 
CGAAACAGGC CTGCCATCTG TGACTCTGGA GCCTCCTCCT ATCGAATCCA CGCCTGCGCC 
CGAGTCGTCA TCGTCAACGA AAGCTGATTT GGTCGATCGT TTGCGCCAGT GTGTTCTGCT 
GTTGCCAGTC ACCCCCTATC ATGGCTGATG ATACGGTATT ATAGGCACAT TCCTGCGACC 
TTTGGATCAC TTGTCAACCT TCTGTCTACC CCGCGCTCAA ACGATGATAT ACAATCAGAA 
CTGATTGAGG TCATGGGCTT CGAAGGCGAT GCCTTGTCGC TGGTCGAGGA ATTGTTAAAG 
CCAGGAGCGA GACAAGATGT GATTGACAGT TGTTTGCGCT CTACCCCTGT GAGTGCTCAA 
TGTGCATCGT ATTGTTGAAT ATTCGCCTAA TCATCCCACA GAACGCGCAG GACAAGAAGG 
AAACGAGACC TGTCCAGATG GACAAGCCCG CATATCTACC AAATGCCAGG ATGACAGTAA 
AGGGGAAGGT CAAGGATAGA AAGAAAATCA TAGACATCTC AGACATTGTT GGATCCGCCG 
AAGATATCAA TAAAAGATTG CAAGAGCAGA TTGAAGGTCC CAAAGCGATG TTCTCGGAGG 
ATGGTCCCGT AGGTTTTTCA TTGATTTGTT GCGATTCCTG CTCCGATTCA GCTGACGTTA 
ATGAAAATAC AGAAAATGGT CGAGCAAGAG ATTTTGCCTC ATGTTTACAC AGCAACGGGA 
AACAAATTCG TCCCTCTTTC CCATGGCGGG AAGTTCGCGC TTCCTGAGGG TACAAAGCGA 
GAATACACAG ATGTGGGTTC AACTTTTCTG TTGATGGTAA GATAGACCCT GATCCTGTCA 
TAAGACGTAT GAAGAGGTTA TTATACCTCC AGCCAATCCT ATACCGCCTA AGAAAACAGA 
GCGCCCTGTC AAGATTGCTG AATTGTCACC CATAGCTAGA GGGTGTTTCC CTGTAAGCAA 
AAGGCCGTGC TTACAGTGCT AAGTTAACAT TTGTCGCAGA AATACATTCA GTTGAATAGG 
ATGCAAAGTA TCGTACAACC TACTGCTATG AACACAAACG AGAATATGTT GATTTGCGGT 
GAGGAAGCCT TTTGCTTGCG AAGTATTGAC TGACCATTTG TTTTCCAGCG CCCACTGGTG 
CCGTGAGTCT ATAACACTGC CGCTTGTACA AATTAGAGGC TCACCTGCTT TTTATAGGGT 
AAAACTGATG TTGCTATCAT GTCAATCATC CGCGTTCTGT CTCAGCACGT TATCGACGGT 
CCTACCTCCC ATCCTTCAGG CTTCAACATC AATCGCAACG CTTTCAAGGT TATTTATGTT 
GCGCCCATGA AGGCCCTTGC TGCAGAAATT GTGTCTAAAT TTGCAAAACG CCTTGCATGG 
CTCAGTATCA AGGTCAGAGA GTTGACTGGT GACATGCAAT TAACAAAGCA AGAAATCGAA 
GAAACGCAGA TCATTGTGAC AACTCCTGAG AAATGGGATG TCGTAACTAG AAAGCCGACA 
GGTGAAGGAG AACTGGCTTC TAAAGTCAAA TTGCTTATCA TCGATGAGGT CCACTTGCTT 
GCGGAAGATC GAGGTGCTGT CATTGAGACT ATTGTGGCCA GAACACTCAG ACAAGTACAT 
ACTAGTCCTT GTGCTATCCC AAAGACTTTC ATTGCTGACA GAAAACAGGT TGAATCAAGC 
CAATCTCTCA TTCGTATTGT CGGTCTCAGT GCCACCCTGC CGAATTATGT CGATGTTGGA 
GATTTCTTGA GGTACGTCGC AAACTCGTAA CAGCTTGTTC GATCGCAAAC CACCATCTTG 
TAGGGTAAAC CGATATCAAG GTCTTTTTTA TTTCGACGCT TCTTTCAGAC CAGTTCCTCT 
CGAGCAACAT TTCATTGGTG TTTCTGGAAA GCCTCGTTCA GCCGTCTCGG CACGTAATAT 
GGATCGAGTC GTTTTTGAAA AGGTACTTAT CTGTATTTCA TTCAGAAGCA GCACGTTAAC 
ATGATTACAA GGTCTCTGAA CTTGTGGAGG CTGGTCATCA AGTGATGGTG TTTGTACATG 
CGCGGCGAGA CACTGTCAAG ACTGCACAGA CTCTCAAGGA AATGGCTTTA GAAGAAGGTG 
TCTCCACTTT CTTCCAGACC GATGGTCACG CAAAATTCAG TCAGTACAGG GCAGAGCTTT 
CCAAGTCTAA AAACAAGGAG ATGAAGGAAC TATTCGACGC CGGATTCGGT ATCCATCATG 
CCGGTATGCT GAGAACAGAC AGGAATATGA TGGAAAAGAT GTTTGAGGAT GGTTGCATTA 
ACGTGAGTTT CGTTGATTTC CCGCGCAAAT ACCACCAATG ACGGATATTC GTCATAGGTC 
CTGTGCTGTA CCTCAACTTT AGCATGGGGT GTCAATCTTC CGGCACATGC TGTTATCATC 
AAAGGCACCC AGGTTTATGA CACTGGCAAA GGCTCATTCA TGGATCTCTC TGTCCTAGAC 
GTCCTTCAAA TATTCGGTCG AGCTGGTCGA CCTGGATACG CAACAAGTGG AGTCGGCTTC 
ATATGTACCA CCCACGACAA GGTTGATCAC TATGTGACGT CGGTCATGTC TCAGGTGAGC 
ATCCATTTAT TAGCTAATTT CAACAGACTG ATTTCATGTC GTCTTTAGAC GCCTATCGAA 
TCCAAGTGAG TAGCATGTGC CATTTGTCGA GCAGCTAATT CAACATCCCA TCTTAGATTC 
ATCCCCGGCA TGACAGATGC TCTTAACGCT GAGGTGGCTT TAGGAACAAT TACCAATGTT 
CAAGAAGCGA TGCAATGGTT GAGTTACACC TATCTCTTCG GTAAGTGCGT CCATTCGATT 
ACACTTGAGG CAATGTTAAT TATCAGCCCA GTTCGCATGA AGAAGAACCC TTGGGTTTAT 
GGTCAGTGCA GAACCTCATA ACGATGGTAT TCAAGACGCG CTCATCTTGT CTTCACAGCT 
ATGGCTCATG ATGTTACAAA AGACGACCCG CAACTTGGCA ATAAGCGCAA CGAGCTTATC 
GTTCAAGCTG CTCGCCTTCT TCAAAAAGCT AGGATGGTTC GATATGATGA TTTGGCCAAC 
ACATTCGGTA TCACGGATCT AGGTCGCATT GCAGCCAAGT ACTACCTCAG GTTTTCCACT 
ATTGAGACCT TCAGTAAGCC CATTCTTTTG CGTCGCCTTG ATATGGCTGA CCCTGCAATC 
CTCTGTAGAC AGTAAATTCA ATCCGCGAAT GAGCAATGCA GATCTGTTCC AGATGCTGTG 
TGAAGCGACT GAAGTAAGCT AAAGCAAATT GTTTGACTGA ATAAAAAGCT GATATCAAGC 
CGTGCAGTTC GAGCAAATTC AGCTTCGAGA CAGCGAAGTT GAAGAACTTG AGGCCATTAT 
TGGCAGCGGT GTCATCCCAT TGGAAGTTGC CGTAAGTGAT CTCGAGGCTT TCATAAACAA 
GTCTGCAAAT TAATTCTAAA TTCTTTTAAA GGGAGGTGCG ATCAACAAGC GCAACAAAGT 
CAATATCCTG CTCCAAGCGC ATATTTCCAA CGTCTATATC AACGATTTTG CTCTCGTTTC 
TGACGCTGCA TTCGTTGCAC AAGTGAGTGA CGCATCCGAT CCACCAGGTA ATCAGCTCAT 
TGAGAATTAG AATGCTGGAC GTATTATTCG CGCGTTGCTT GAGATTGCTC TTAGCCGTAA 
CTGGGCCAAT TGCTCCTACC TGCTGGTCGA GCTCAGCAAA TGTATTGAAC GCCGACAATG 
GGTTTACGAC CATGGTCTCG CCCAGCTCAA GGTGCTGCAG CGTGAAACCA TTCATAAACT 
TACTCAGTAT ACGCCCGACA GCATGACCAT CTCGGATTTC CGAGACATGA CTGCTCAAGA 
GAATGGCGAG TTCATTCACA TGAACGAGAA GCATGGGCAG GCTGTTTTGG ATGCCGCAAT 
GATGTTCCCA ACTGTCAACC TTACCCACAC CTTGCGGCCG ATCACTCATG ATCTACTGCA 
AATCACCGTA AAGGTCACAC CACAATTCAA ATGGCATAAC AAGATTTCGG GGAGCAGCGA 
ACCGTTCTAT GTATGGGTAC AAGACGAAGA AGGTTTGAAC ATCTATCAAT GGCGTAGTGT 
CCGCGTCACG CCCTCAACTA CGGTTATCGA CATCGACTTT TTCCTACCCT TTGACGATGT 
GCCTCCAGAC TCGATATCGA TTATCTCCAT ATCCGACAAA TGGCTATGGT CCTACGAGCA 
ACTCGTCATT CAGCTGGGCG ATCTCATAAT GCCGCCTCCT CCAAAGGAAT CCACGCAAAT 
CCTTGGCATT CCGTTCCTGC GCCGCTCCTG CTTCAATGAT CCCCAGCTAG AGCAGCGATA 
TGCTCAGACG TTGGACACGT TGAATACAAT CCAGAGCCAT GCCTTCTGGA TGCTTTATAA 
TACTTCTATG AACGCTGTTG TCTCTTCTCC TGTTGGAAGC GGAAAGACTT TACTGGCTGA 
GGGAGCTATA TGGTACGTGA ATTCTCAAGG AGCTCCCCCC TGTTCTTCAA CTAACTCCTA 
ATAGGAATGC TTTCCGACAC AACAAAGAGT CGGTTGTCTT GATAATGGTG CCTGAGCGCT 
ACGCTGTACA TGAGACCGTT GCGAGATTAC GAAATTTATG TCCTCCAAAG CGAAGGGTAA 
TCATCAGACC TCTCTTCAAC GTGTCCGACT TTGACCAACT TCTCTCTGGA GGGCCTGCTA 
TTGGAGTTAC GACACCTTTT GCAGTCCTGA GCAATGAAAA AATTGATAAC TTCCTGAGTA 
CTCAACGCTT GGGGCTGTAT GTCTTTGAAG ATTTACACCT TCTCGATGAA GTGTACGAAC 
TTGCCGTATC AAAGATTTTG ACTTTTGCCC GCACTGCACG AACCCGAATC GTCGGTACGA 
CGTCATCTCT CAGCGATCCT TCTGATCTTG CTGAATGGCT TGGGGTTGAC CCTGGGCCGT 
TGGATCAATG GGGAAAACCT GTCGCTTCAC AACCTCCCGC TTTGTTCAGT TTCGCTCCCT 
CAGATCGTGG CAATCATATT TCTGTGTCCA TCAAATCGTT CACAATTCCC CACGGTCCTA 
CCTTACTTCG CTCTATGATC AAACCCACTT ACGATATTCT CAAATCCGTG ACAGGCGGTG 
CTATCATTTT TGTGCCATCC GTTCAAGCTT GTGCCACCGT CGCCGCCGAT CTTGTCACTC 
AATCCGGAAC CGAGATGAAC GTCGATGGCT TCCTTTCTCG GCCTCGCGAC GAGGTCGAGC 
CGTTCGCTGA ACGCTTGAAA GATGAGAAAT TGTTTGAACC GGTGCTTCAT GGTATCGGTT 
ACATTACTCG TGATATGGCA CCGACGGATA TCGCCATTGT TCTTGAGCTT TTTGCGAGTG 
GTATTATCCG TGCTATCATC GCCCCTCGTC AATCATGTTG GACACTTCCA GTGCGAGGTG 
AAAGCGTCAT CATTATGGGC ACGCAGTACG TGCGCATGGA AGCGAGACCC GAAGGCAAGG 
GGCCCAAAGC AAAGCCTGAA AAGCACCTGG TAAGCTATTC AGCGAAAGAA TTGGTGAAGA 
TGCAAGGCTT CGCTGTGGTT TCGGCGGCCC CCACTGCCCC GGGTGGAAGG ATGTTTATCA 
TGTGCCAGGC AGAGCAGCAA GTCATGATCT CTCGAGTACT CAAAGAGGGT CTCCCATTGG 
AATCTAAAAT CCTCGATCTT CTTTCACGTA GATCTACACC ATCCTCTTCG ATCGACCCAA 
GAGCTATTCA AGCTCTCAAC AATTTTTTCA AGGGTCGCAG ACCTCCTCCT CGTCCTACCG 
TCGACAGACC CCGCCGACCT GACGGCAGGA AGGCGGACAT GATGGACATC GTAAATTGGT 
CATTCCTTTC TGTCAGAGTG AAGAGCAATC CTAGCTACTA CCAGCTCGTT AAGGGGTCAG 
AAGCGGAAGG TATCTCAAGA GTAATTGACG GATGGTTTGA TGCTATGGAT GGAATAAAGG 
TGGAGACTGT TGAGGAGCAA AGGAGGCTGA CCGTTGAGGA TGCGGAAGCG CAAGAAGATA 
GAAAGGACGA CGTGGAGAAG GCAGACTTGA ATTCTGACCA AGAGGGTGGA GTTGCAAACG 
TTGAGGAGAA CGGCAACTTA GATGAATCAG AACAGAAGGG CACAGCGAGC GAGAAGTCAG 
GACAGAGTGT AGGACTTTGT AACACTTTGG AAGTCAATTG A 

 

Protein sequence

MSVQHYLGTL FQPQPPTFED SWKAVISSWG PSQFRAQAID DFEPVLETSP WPSVLNYLTE 
TGLPSVTLEP PPIESTPAPE SSSSTKADLV DRLRQHIPAT FGSLVNLLST PRSNDDIQSE 
LIEVMGFEGD ALSLVEELLK PGARQDVIDS CLRSTPNAQD KKETRPVQMD KPAYLPNARM 
TVKGKVKDRK KIIDISDIVG SAEDINKRLQ EQIEGPKAMF SEDGPLTLMK IQKMVEQEIL 
PHVYTATGNK FVPLSHGGKF ALPEGTKREY TDVGSTFLLM TYEEVIIPPA NPIPPKKTER 
PVKIAELSPI ARGCFPKYIQ LNRMQSIVQP TAMNTNENML ICAPTGAGKT DVAIMSIIRV 
LSQHVIDGPT SHPSGFNINR NAFKVIYVAP MKALAAEIVS KFAKRLAWLS IKVRELTGDM 
QLTKQEIEET QIIVTTPEKW DVVTRKPTGE GELASKVKLL IIDEVHLLAE DRGAVIETIV 
ARTLRQVESS QSLIRIVGLS ATLPNYVDVG DFLRVNRYQG LFYFDASFRP VPLEQHFIGV 
SGKPRSAVSA RNMDRVVFEK VSELVEAGHQ VMVFVHARRD TVKTAQTLKE MALEEGVSTF 
FQTDGHAKFS QYRAELSKSK NKEMKELFDA GFGIHHAGML RTDRNMMEKM FEDGCINVLC 
CTSTLAWGVN LPAHAVIIKG TQVYDTGKGS FMDLSVLDVL QIFGRAGRPG YATSGVGFIC 
TTHDKVDHYV TSVMSQTPIE SKFIPGMTDA LNAEVALGTI TNVQEAMQWL SYTYLFVRMK 
KNPWVYAMAH DVTKDDPQLG NKRNELIVQA ARLLQKARMV RYDDLANTFG ITDLGRIAAK 
YYLRFSTIET FNSKFNPRMS NADLFQMLCE ATEFEQIQLR DSEVEELEAI IGSGVIPLEV 
AGGAINKRNK VNILLQAHIS NVYINDFALV SDAAFVAQNA GRIIRALLEI ALSRNWANCS 
YLLVELSKCI ERRQWVYDHG LAQLKVLQRE TIHKLTQYTP DSMTISDFRD MTAQENGEFI 
HMNEKHGQAV LDAAMMFPTV NLTHTLRPIT HDLLQITVKV TPQFKWHNKI SGSSEPFYVW 
VQDEEGLNIY QWRSVRVTPS TTVIDIDFFL PFDDVPPDSI SIISISDKWL WSYEQLVIQL 
GDLIMPPPPK ESTQILGIPF LRRSCFNDPQ LEQRYAQTLD TLNTIQSHAF WMLYNTSMNA 
VVSSPVGSGK TLLAEGAIWN AFRHNKESVV LIMVPERYAV HETVARLRNL CPPKRRVIIR 
PLFNVSDFDQ LLSGGPAIGV TTPFAVLSNE KIDNFLSTQR LGLYVFEDLH LLDEVYELAV 
SKILTFARTA RTRIVGTTSS LSDPSDLAEW LGVDPGPLDQ WGKPVASQPP ALFSFAPSDR 
GNHISVSIKS FTIPHGPTLL RSMIKPTYDI LKSVTGGAII FVPSVQACAT VAADLVTQSG 
TEMNVDGFLS RPRDEVEPFA ERLKDEKLFE PVLHGIGYIT RDMAPTDIAI VLELFASGII 
RAIIAPRQSC WTLPVRGESV IIMGTQYVRM EARPEGKGPK AKPEKHLVSY SAKELVKMQG 
FAVVSAAPTA PGGRMFIMCQ AEQQVMISRV LKEGLPLESK ILDLLSRRST PSSSIDPRAI 
QALNNFFKGR RPPPRPTVDR PRRPDGRKAD MMDIVNWSFL SVRVKSNPSY YQLVKGSEAE 
GISRVIDGWF DAMDGIKVET VEEQRRLTVE DAEAQEDRKD DVEKADLNSD QEGGVANVEE 
NGNLDESEQK GTASEKSGQS VGLCNTLEVN