Gene CNI01500 details

Gene Information

• Locus tag: CNI01500
• ID: 3259419
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: -
• Start bp: 432699
• End bp: 436224
• Gene Length: 3526 bp
• Protein Length: 950 aa
• GC content: 51%
• IMG OID: 638258633
• Product: specific RNA polymerase II transcription factor, putative
• Protein accession: XP_572987
• Protein GI: 58271662

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCGACCCA AATGAATGAT CTATCAGCAG CCTCGAGGGA AAAGATCAGG AGAGGATACC 
GCGCTTGGTA AGCACCCACT CACAGAGCCA GTCCCAGCGG TCCGCCCACC GCCATCCTCC 
TCTCGGTACT GACACCAGCA CGCACCTCAC AGCCTCCACT GCAGGTCTCG CAAAGCAAAG 
TGCGATCTCG CAAGTATTCC GGGTCTCGCT ATCTACGCCA TACGCATGCT GATCCACAAT 
CTTCATAGGG AGACATTGAC GCGCCCTCTT CTCCGCCATG CAGCCGATGC AAGCGCGAAA 
GCCGAGAATG TGTGTTTGCT CCCTCTCGCC GGGGAGGAAA CAACAAGAAG AGGGCACGTA 
CGGATTCAGA AGACATTTCC AGAGAGGACG AAGATCCGCC GCGCCCACTG GGTCGTTCCA 
CAGCCGAAGT TACGTCGGGC GAAGAACATT CCTCCCAGAC TTTTCCGTAC CCTCAACCGC 
CTCCACAGCC CCGACATCCA TCTGTGCATA ATCTTCTAGG TCATTCTCCG CCACCCGCTC 
GATACCGTCA GCATTTCGGC CATACATCTT CCAGTTCACA ATCGTCTCCT CAAACTAGCT 
TTTCCGCCGA CCATGCAACT CCACAGACCC GACCCACACT GTCTAATGTT CAGTCTCACA 
CAGCCACAGG ATACCCAGAC TCTCCTCCTT CACCCAGACG AAGACGCACG GCCAATCCAC 
CGTTGCACGC TGCCGATCCA AGTAGTATTG TTGTAGCAGA CATGCGTAAT GAGAGTGATG 
CGTTGCAGAT CCTTGCGCTT GCTAGTGGTC AGGCAGCAAA TAGGGATGGT GAAGAAGAGA 
GATCTGATAG GCATGACGGC CATAGCGTGC CAGGCACTGT CGATTCTACA GGTATGGGAG 
GTCATCAGCA GCAAATGAGG GGAGCGCCGT CGTCTCCGGA AAAAGAAATG CAGCTGGCAA 
AGCTGGCGCA GTTCCCTCTG GTTAAATTGG GAATCCTCAG CGTTGAGCAG ACGACAAGAC 
TTGTGGACAT GTTTTTCAGG TGTCACCATC ACTTTTTCGT TAGTGTCTCC GCTTCTTGCA 
TTGCTCAACT CAAAATTCAG AAAATGCTAA CTCTAAACTT TAGCCAATTA TTCCCTCGGA 
TGGCATCCCA AGGACGCTTG AACAATTATC CGTCTTTGCC CAAAACGAAA AATACCTTTT 
GGCGACCATC ATCATCATTT CGAGCCGGGT GGAAAACACG CCAGAGATGA GAGAGATCCA 
TGAACGCTCA TGGGCAGTCA TGCGCAGGTG GATCTCCAAA GTCCAATGCC TCGGTGAACC 
ACCCACCATA GGCCTCGTCG AATCCCTCCT TTTACTCGCC GAGAACCTGC CACGCACTTC 
ACGTGAGATG ATGTCTGATG ATTCTACCGA GACGGATGCG ATAGAAGAGC CGCACGGTGT 
GGAGAACAGG CAGGCTTGGC AGATGATAGG TTTGGCGGTG AGGAGTGCGT ATGAGATGGG 
GTTGGATAAG TTGGGTCTGC AGTTGATACC GGAGACAGAG AGAACGCTGG AGTTGGAGAG 
GGCAAAGTTG GTTTGGGTCT GTGAGTGCGA CCATGTCCCT ACACGAATTG ACGTGATGCT 
GATTGTTTGG CAAGACTGCT ACCTTTTTGA CAGACAGTGA GTTGATTAGT TTTAGCTTTG 
GATTTTATTC CAAACGCTAA TTTTTTTTCC TAGTGTCTCT ATGCGACTCG GTAAAGGTTT 
CTGGACACGA GGTGGCGCAG TCTGTTTCCA AGGCTACTCT TCCTCTGCTC AAACTGGCCC 
TGCCGCTGCT CTCGTCAATT TCCCCTTTTT ACGCGAAATC AGGCCTGGCG ATCCTCATAG 
CGATCATCCA CAAGATGACT TGGGTAGTTT GGTACAGGCG TATCTGGAAC TGACGATGAT 
GATGAGTAAC GCGCATGATG TACTTTATCC TAATGCGGCG AGAACAAGGT CACTTGTTGT 
GTAGGTATTT TTTTAAATTT TTTTTTGTCT TCTTTATGGG ACAAGTACCC GAGAAATGCT 
GATGGTTGTT AGTTACGGAG AGTACTTCAA ATATATTGAC GAAATGGCAC GATCGCTGGA 
TGGGTTCAAG ATTTTATGGC GACGTAAAAA ATGGACACTG TTCCCTCTCA CTGACACTGT 
CTGGGTCATG TTCTACTACA TACAGCTCTA TATATGTGCC TTCAGTTTCG TCAGTACCTA 
CTTGGCCTAC TTACATAATG TTATCAACTG ACGTCTCTTG CAGCAAGCGC ACGTCGAACG 
GGCAACTATC CGAGGCGAAG AAGAGTACAA ACTCTTGGAA CAACGGCACA AGGAACAAGG 
AGGTACGACA AAACTCGCCA AACCGTCTCT CAGTCTTTTC CCGCGGGGTG CTGCTCAAAG 
TCCCGATGCG CGATACATTT TCCAAATGTG TGACGCCGCG AGAGAACTTA TACACATTTG 
CGTGGATAAT CTGTACCCTG GTGGAGCGCT GCCTTATCTG CCTTCAAGGT TCTTATTGTG 
GTTCACGTAT GGAGCGATTG TGCTGTTGAA AGCTATTTAC TCAGGGGCTA TGCTCAGAGC 
GGACCACAAA AGGTGAGTAC ATTCTCCATT TTTCTTTTTT TTTGGGTACT GAACAAGATT 
GTAGAACCCT TGATTTGATT GACCGGCTTT GCACTTGCTT TGCTCAGTGC TCGACAGACG 
AAGAGTACCC CGCGGTACGA TACGGCAAGC AGCTCGAAGC ACTCCGCAAT AAGCTTGCCG 
GGTTATCAGA CGTCAAAAGC ACTCAAAGCC CCAATGGCTC TCAGACGGTC AGACTTCCTC 
GTACGCAAAA CCGGGCCCCA GAGGTCCGCG TCAGTCCATC CCAGACTTCT ACCTCTCCCA 
ATACAGTGCC TCCGCCCCAA CAGTTTGACC CACGGCCGTC GACATTTCAA CCTGCCCGGC 
CTCATGCTAT GCCAAACGAA CACGCCGTCA ATACGCCGAC GTGGCAGTTA CCGGTCTTGC 
AGCAGTACAC TCAGCCAGTC ACATTCCCAT ACCCTACAAC CCCAGTCTCC TTTACTACGG 
GTCCTTCTAC AGAAATGTCT GCGCCATACG TCGCGCCGCC GCACCAACAG CCATTCATGG 
AATTTGGTGT GGCGCAGTCA TCAGACGGTT TGAATTTGGG TATGAACGAC CATCATAACT 
TGGGGTTCAC CACGCTTGAT GATTGGTTTG GGTTCGGAAC AGCCGGTACG GCTGGTGGAG 
CTGGCCAAGG TGGGAATGGA GTGGATGATC CGATGGGATT GGCGAATGTC GGGTTGGATC 
TGCAGGATTT CTGGATGAAC GTCGGGCCGG GTGAGGTGAG TGTGTGGTGG TGGTTTCTTA 
CATTTGCTGG TATTGGAAAA TATAGCAGAT TTGCTGACTC CCCTTTTTTC TTCCCTGATC 
AGGCTCAAGG AGGGTTCCCG TTCCGATAAA CAGCGTTTCT TTCCCTGTAC TTTTGTTACG 
ACTAATACAG AGCGATTAAT GTTAGGATAA TGTATTACTA GTTAAT 

 

Protein sequence

MNDLSAASRE KIRRGYRACL HCRSRKAKCD LGDIDAPSSP PCSRCKRESR ECVFAPSRRG 
GNNKKRARTD SEDISREDED PPRPLGRSTA EVTSGEEHSS QTFPYPQPPP QPRHPSVHNL 
LGHSPPPARY RQHFGHTSSS SQSSPQTSFS ADHATPQTRP TLSNVQSHTA TGYPDSPPSP 
RRRRTANPPL HAADPSSIVV ADMRNESDAL QILALASGQA ANRDGEEERS DRHDGHSVPG 
TVDSTGMGGH QQQMRGAPSS PEKEMQLAKL AQFPLVKLGI LSVEQTTRLV DMFFRCHHHF 
FPIIPSDGIP RTLEQLSVFA QNEKYLLATI IIISSRVENT PEMREIHERS WAVMRRWISK 
VQCLGEPPTI GLVESLLLLA ENLPRTSREM MSDDSTETDA IEEPHGVENR QAWQMIGLAV 
RSAYEMGLDK LGLQLIPETE RTLELERAKL VWVYCYLFDR HVSMRLGKGF WTRGGAVCFQ 
GYSSSAQTGP AAALVNFPFL REIRPGDPHS DHPQDDLGSL VQAYLELTMM MSNAHDVLYP 
NAARTRSLVV YGEYFKYIDE MARSLDGFKI LWRRKKWTLF PLTDTVWVMF YYIQLYICAF 
SFQAHVERAT IRGEEEYKLL EQRHKEQGGT TKLAKPSLSL FPRGAAQSPD ARYIFQMCDA 
ARELIHICVD NLYPGGALPY LPSRFLLWFT YGAIVLLKAI YSGAMLRADH KRTLDLIDRL 
CTCFAQCSTD EEYPAVRYGK QLEALRNKLA GLSDVKSTQS PNGSQTVRLP RTQNRAPEVR 
VSPSQTSTSP NTVPPPQQFD PRPSTFQPAR PHAMPNEHAV NTPTWQLPVL QQYTQPVTFP 
YPTTPVSFTT GPSTEMSAPY VAPPHQQPFM EFGVAQSSDG LNLGMNDHHN LGFTTLDDWF 
GFGTAGTAGG AGQGGNGVDD PMGLANVGLD LQDFWMNVGP GEAQGGFPFR