Gene CNI01180 details

Gene Information

• Locus tag: CNI01180
• ID: 3259738
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: +
• Start bp: 289360
• End bp: 291552
• Gene Length: 2193 bp
• Protein Length: 515 aa
• GC content: 50%
• IMG OID: 638258605
• Product: vacuolar ATP synthase, putative
• Protein accession: XP_572836
• Protein GI: 58271360
• COG category: [C] Energy production and conversion
• COG ID: [COG1156] Archaeal/vacuolar-type H+-ATPase subunit B
• TIGRFAM ID: [TIGR01040] V-type (H+)-ATPase V1, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.204293
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTGTTTCCA CGACATCCAC ATTCCACCAG CCATCATGGT ACATGACCCA CGCATCTCAG 
ACAGCCAACT CGCCCAGATC AACGCAGTAA GCACGCCCAC AGCCACCGTA CACACTCCCG 
CAATCACTCA CACCTACTCA GGCAGCGGCT GTCCGCGAGT ATGCCATCGA GCCACGAATG 
GGTAGGTCAG ACCATATCGC GACCACGCTG ACCATCAGAC TACCGTACCG TCTCTGCCGT 
CAACGGGTAA GCCTACATCG TGCTGGACAC AGCTAACAGA ACAGTCCACT GGTCGTTCTC 
GATAATGTCT CGGTGAGTTA TCGCACGGTT CGGGCACAGC TAACCAATGC AGTTCCCTTC 
CTACAACGAA ATCGTTCAGC TCACTCTCCC GGATGGCACT ATCCGGGGTG GTCAAGTGCT 
TGAAGTTAGC GGAAAGAAGG CTGTCGTCCA GGTGCGTTGC ATATCCCCGT GAGCACCGCT 
CACCAATCAG GTGTTCGAAG GGACTTCTGG TGTAGACACC AAGGCGACTC GAATCTCCTT 
TTCCGGATCT TCCATGAAGC TGGCTGTGTC CGAAGATATG CTTGGGCGAG TGTTCAACGG 
TAGTGGTAAC CCTATCGATA ATGGACCAAA GGTCTTTGCC GAAGATTATC TCGACATCAA 
CGGTGAGTAT TCGGTGAAAT GGATAAACAT AGCTTATTGC CCGGTTCAGG TTCTCCAATC 
AACCCTTACT CTCGTATCTA CCCCGAGGAG ATGATCCAGA CTGGTATCTC TACCATTGAT 
ACTATGGTAA GATTTCAAAT ATGCTGGGGA ATACCAAGCT CACATCTTAT CGTGTAGAAC 
TCTATCGCCC GTGGACAGAA GATTCCCATC TTCTCTGCCG CCGGTCTTCC CCACAATGAA 
GTGAGTCTAC CACTACCGTC ACTATCGAAC TGTGACTTAT GACCAAAAAC AGATTGCCGC 
CCAAATCTGT CGACAAGCCG GTCTCGTCAA ACGTCCCGGT GCCACCAAGG GTGTCCACGA 
CGGCCACGAG GACAACTTCT CCATCGTTTT CGCCGCTATG GGTGTTAATA TGGAGACCGC 
CCGATTCTTC AAGCGAGACT TTGAGGAAAG TGGAAGTATC TCCAACTCTA CCCTATTTGT 
CAACCTCGCT TCCGACCCTA CTATCGAACG TATCATCACC CCTCGTCTCG CTCTTACCAC 
TGCCGAGTAC TTTGCTTATC AGCTTGAGAA ACACGTGTTG GTCGTCATGA CCGACATGTC 
GAGTTATGCC GATGCTCTTC GAGAAGTCTC TGCTGCCCGA GAGGAAGTAC CAGGTCGACG 
AGGTTACCCT GGTTACCTTT ATACCGATTT GGCCACCCTT TACGAGCGTG CTGGTCGAGT 
TGAGGGAAGA AACGGTTCCA TCACTCAGGT TCCCATCTTG ACCATGCCCA ACGACGGTAA 
GTCGTGTCTG GTCCTCTTAA AACCAGATCG TAGACTGACT CTTGTTCATT TTGTAGATAT 
TACCCACCCT ATCCCTGATT TGACTGGTTA TATTACAGAA GGTCAAATCT TTGTCGACCG 
TCAACTTTCC AACCGTCAAA TCTACCCCCC CATTAACGTC CTTCCTTCAT TATCCCGTTT 
GATGAAGAGC GCTATCGGCG AGAAGCTTAC CCGCAAGGAC CACGGTGACG TGTCTAACCA 
GCTTGTACGT CTTTTCGTCA TAATCTCACC CTTTTTGAAT ACGAAACATT CAGCTGATGG 
TGCTGTGGCG CAGTATGCCA AGTATGCCGT CGGTAAGGAT GCGGCTTCCA TGAAGGCTGT 
CGTTGGTGAA GAAGCCTTGT CCGCCGATGA TAAGCTCGCC CTTGAGTTTT TGGATAGGTT 
TGAAAAGGAG TTTGTCGGTC AGGGTGCTTA TGAGGCTCGA ACCATCTTTG AGTCCCTTGA 
CATTGCTTGG GAACTTTTGA GGATCTTCCC CAAGGAGTCT CTCAACCGAA TCAGCCCCAA 
GGTACGTACC AGAAGCGTGC TGAAAAAAAT GGATTATGCT CATTTTATGT TTCAGATTCT 
CGCCGAATTC TATGCGCGCA GGCCCAAGGG AACTAGTGCT GAACAACCCG AAGAGAATAA 
GGAAGATAAT CTTATAGACG CGTAAGGAGG GCTTTATAAA AAAAAACAAT TAAAATAGTG 
TATCCATGTT CATGACATTG CGTGTCGTTT GGC 

 

Protein sequence

MVHDPRISDS QLAQINAAAA VREYAIEPRM DYRTVSAVNG PLVVLDNVSF PSYNEIVQLT 
LPDGTIRGGQ VLEVSGKKAV VQVFEGTSGV DTKATRISFS GSSMKLAVSE DMLGRVFNGS 
GNPIDNGPKV FAEDYLDING SPINPYSRIY PEEMIQTGIS TIDTMNSIAR GQKIPIFSAA 
GLPHNEIAAQ ICRQAGLVKR PGATKGVHDG HEDNFSIVFA AMGVNMETAR FFKRDFEESG 
SISNSTLFVN LASDPTIERI ITPRLALTTA EYFAYQLEKH VLVVMTDMSS YADALREVSA 
AREEVPGRRG YPGYLYTDLA TLYERAGRVE GRNGSITQVP ILTMPNDDIT HPIPDLTGYI 
TEGQIFVDRQ LSNRQIYPPI NVLPSLSRLM KSAIGEKLTR KDHGDVSNQL YAKYAVGKDA 
ASMKAVVGEE ALSADDKLAL EFLDRFEKEF VGQGAYEART IFESLDIAWE LLRIFPKESL 
NRISPKILAE FYARRPKGTS AEQPEENKED NLIDA