Gene CNI00870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI00870 
Symbol 
ID3259472 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp217514 
End bp218426 
Gene Length913 bp 
Protein Length236 aa 
Translation table 
GC content49% 
IMG OID638258572 
Producthaloacid dehalogenase, putative 
Protein accessionXP_572850 
Protein GI58271388 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCTG TTGTTTGTGA GTGGTTACGA GACCTCAGCT GAGCTTGAGC ACCGGCTGAC 
GATTTTCTTT TTATCCACAG TCGACGTTGT GGGAACATGT TGTATGTTTT GGAAGCCTCC
ATCCTCTATC TGTTCTAGGC TGATGATCGT CCCCTTCAGT CTCTTACGAT AACGGTGCCG
AAGCTCTCCA GGCTCGTCTC GGTCCCAAAC TAGCCAAATA TGGCATTCCC TCCAAGCTCC
TTTTCTACTC CTGGGTCTGC TCCACTGAGC GTGACTATTC ATACCTCTCC CAGATCAAAC
AATACAAGGC TTTCTTCGCC ATCCTTTCCA ACACTCTCAC ACGAGTTCTC TTTCAAGCCG
GTGTCCCCGT TGAAGCTCTT GACGACTTTT TCACGGCCGA CGACGTTGAC TACATCATGA
ACGAATATAA GAAGCTCAAG GCCAGACCGG GATTGGCAGA GATGATGCAA ACTCTGAGGG
ATGGGGGTTT TGAGGTCTGG TGTTGTTCCG ATGCCAATGT CGATCGAGTC AAGGGCTACT
TTGACAATGC TGGTGTCGAG ATGCCCCTTG ACCACATTCT CTCAGCAGAC ATGGTCAAGG
CTGGTAAGCC TGAGGCTGCT GTTTACAAGT TTGCTCGGGA AAAGGCTGGC TCCGATCAAC
CGGGAGAAGT TTCTGTCTTT GCTGGTAAAT ATTCTTTTTC TTGCTTCGAA TCGATGCGTG
CAAAGCTGAC TAAGTTACAA TAGCTTCTCA TGCTTGGGAC TGTGCTGCTG CCAAGGCTGC
TGGTTTCCTC ACTGCCTACA CCACTACTTA CGAGTACGAT GAATGCGAGG TTATTTTCGG
CAAGTCTGAT TTGGTTGCCC CTGATCTTGT CTCCTTAGGC AAGGGTATCG TTGAGAAGTG
GGGTAAGAAG TAG
 
Protein sequence
MPSVVFSYDN GAEALQARLG PKLAKYGIPS KLLFYSWVCS TERDYSYLSQ IKQYKAFFAI 
LSNTLTRVLF QAGVPVEALD DFFTADDVDY IMNEYKKLKA RPGLAEMMQT LRDGGFEVWC
CSDANVDRVK GYFDNAGVEM PLDHILSADM VKAGKPEAAV YKFAREKAGS DQPGEVSVFA
ASHAWDCAAA KAAGFLTAYT TTYEYDECEV IFGKSDLVAP DLVSLGKGIV EKWGKK