Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI00870 |
Symbol | |
ID | 3259472 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | - |
Start bp | 217514 |
End bp | 218426 |
Gene Length | 913 bp |
Protein Length | 236 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258572 |
Product | haloacid dehalogenase, putative |
Protein accession | XP_572850 |
Protein GI | 58271388 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTCTG TTGTTTGTGA GTGGTTACGA GACCTCAGCT GAGCTTGAGC ACCGGCTGAC GATTTTCTTT TTATCCACAG TCGACGTTGT GGGAACATGT TGTATGTTTT GGAAGCCTCC ATCCTCTATC TGTTCTAGGC TGATGATCGT CCCCTTCAGT CTCTTACGAT AACGGTGCCG AAGCTCTCCA GGCTCGTCTC GGTCCCAAAC TAGCCAAATA TGGCATTCCC TCCAAGCTCC TTTTCTACTC CTGGGTCTGC TCCACTGAGC GTGACTATTC ATACCTCTCC CAGATCAAAC AATACAAGGC TTTCTTCGCC ATCCTTTCCA ACACTCTCAC ACGAGTTCTC TTTCAAGCCG GTGTCCCCGT TGAAGCTCTT GACGACTTTT TCACGGCCGA CGACGTTGAC TACATCATGA ACGAATATAA GAAGCTCAAG GCCAGACCGG GATTGGCAGA GATGATGCAA ACTCTGAGGG ATGGGGGTTT TGAGGTCTGG TGTTGTTCCG ATGCCAATGT CGATCGAGTC AAGGGCTACT TTGACAATGC TGGTGTCGAG ATGCCCCTTG ACCACATTCT CTCAGCAGAC ATGGTCAAGG CTGGTAAGCC TGAGGCTGCT GTTTACAAGT TTGCTCGGGA AAAGGCTGGC TCCGATCAAC CGGGAGAAGT TTCTGTCTTT GCTGGTAAAT ATTCTTTTTC TTGCTTCGAA TCGATGCGTG CAAAGCTGAC TAAGTTACAA TAGCTTCTCA TGCTTGGGAC TGTGCTGCTG CCAAGGCTGC TGGTTTCCTC ACTGCCTACA CCACTACTTA CGAGTACGAT GAATGCGAGG TTATTTTCGG CAAGTCTGAT TTGGTTGCCC CTGATCTTGT CTCCTTAGGC AAGGGTATCG TTGAGAAGTG GGGTAAGAAG TAG
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Protein sequence | MPSVVFSYDN GAEALQARLG PKLAKYGIPS KLLFYSWVCS TERDYSYLSQ IKQYKAFFAI LSNTLTRVLF QAGVPVEALD DFFTADDVDY IMNEYKKLKA RPGLAEMMQT LRDGGFEVWC CSDANVDRVK GYFDNAGVEM PLDHILSADM VKAGKPEAAV YKFAREKAGS DQPGEVSVFA ASHAWDCAAA KAAGFLTAYT TTYEYDECEV IFGKSDLVAP DLVSLGKGIV EKWGKK
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