Gene CNI00860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI00860 
Symbol 
ID3259593 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp215244 
End bp217124 
Gene Length1881 bp 
Protein Length516 aa 
Translation table 
GC content49% 
IMG OID638258571 
Productconserved hypothetical protein 
Protein accessionXP_572737 
Protein GI58271162 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTAT CTCCCACCTA TCCCAACCAA GAAGATCGTC TACTCCCTGT CCAGAACCGT 
ACAGAGTCGT TCTGGCTTTC TGAACGCGAC CCACTTCTGC AGAATGCCCA CACTACACCT
GAGCTCCCAA GGTCTGCCGA CGTTGTCATC GTTGGAAGTG GCCTCACTGG AGCCATGATG
AGCTATCATG TGTACGAAAA TGCCCGAAAA GCTGGGAGGG ACATCAAGAT CGTTATGCTT
GAGGCAGACG AATTTTGTGG TGGGGCTACA GCGAGGAACG GTGAGTCGTG ATTAGTCTTT
TTATGACAGC AGATTATAGC TGATAGCTTG TTACTTGTAG GCGGTCACTG TAAGCCTATG
ACTATTTTCG GCTACCGCGC AGAGGCAGCA AAACATGGAC CGAAAATCGC AAACCAGCTT
CTCACATTTG AAGCCGCTGC TCTTCAACAG TACGCTGCGA TCGTCAAGAA GGAAGATATT
GATTGTGACA TGCACGTCAC CAGAGCTTTT GACGTTTGCT TCAGGAAGGA AGACGCTGAG
GCAGGCAAGA AGGATTACGA GGCGAGAAAG GCTGCTTGGG GTGAGGATAT GGCCAAACAC
GACTTGAGAG TGGTAGAAGA TCCTAAAGAA CTTGAGGCGC TTACAGGTGT GCGAGGAGGG
TATTGGGGCG CGAGCTACCC TGCCGGTCAC CTCTGGCCTT ACAAACTTGC TTCTGCTTGT
AAGCCATATC CTCCTTGCCT GTGCGTAAAA ATGGAGCCTG ACAAAAGATA CAGTAACACA
CATTGGCCTA AGCCGTGGTC TCAACTTTCA AACCCATACG CCCGCTCTAT CTCTTGAACG
ATCCCCCTCC CAACCCAGTC AATGGGTGGT CACCACCCCC CGCGGATCTA TCACGACCAC
TTCTGTCGTG GTAGCCACCA ACGCCTATAC TTCTGGCTTC CTTCCCGAAT TCAAATCTCT
CATCTTCCCT GTCCGTGGTA CCGCATGCTC CATTACCCCC GCTCCTTCCC ACTCCCACGG
GTCTATTCCG GGACCTATCA AATACACCTT TGGCTTCCGA CATGGCCCTG GGGAGGTAGA
CTATATGATC CCCCGACAGG GTAGGGGTAG GATTCCTGGT AGCGGAGATA GGAGTCTCAT
TCTTGGCGGA GCCAAGGGTT GCTTCTTGAG CAATATAGAT CAGTGGTATG ATAATAAGAA
CGATAATGAG CACATGCCTG GAGCTCAAAA GTACTTTGAA GGCTTTATGA AAAAGTACTT
TGTGGGTTGG AATGGTAATA AGCACGGTAA CGTTGATAGA GTCTGGTCTG GAAGTGAGTA
CATCAATTGT AAACCACCAT GGTCCTCAGC TGACGAAGTG TCCCTTAGTC TTGGGCTACT
CAAGCGATCT TCTTCCCTAT GTCGGTGAAG TCCCTAACAA GCCAGGAGTC TTTATTTGTG
CCGGGTTCAC AGGACATGGT GAGCCTTGAT CATAGCAACT CGTAGCGAAT TTACAGCTGC
TGATGAGCCT CTGTTTCTTA GGTATGCCTC GTATACCTGG TTGCACCGCC GCTCTCTCCT
CTCTGGCTTT CTCTTACCTT TCGAACGGCA CCACGACACC TGACGCTAAC AAGGCCTTCC
AAGATGCTCT TCCCCAACCA TATTGGTTGA CCAAGGAAAG ATTTGAGTCC AAGATAAACT
TGATTAAGGC AGCTATGGGT CAAAGGGATA AGGCAAAATT GGATACCACC AATCAGGCCG
ACGAAGCGAT TCTGGCGGCG AAGATGGGGG ACGCAAAGTT GTAAAGAATT TAGTACTAGA
GATAATACAG TTATATGCGT AGACTCTTCT CAGGCACTTT CGTTTAGTTG TAAGATTGTA
GGTTCTTTCC AGTTATCATG T
 
Protein sequence
MTVSPTYPNQ EDRLLPVQNR TESFWLSERD PLLQNAHTTP ELPRSADVVI VGSGLTGAMM 
SYHVYENARK AGRDIKIVML EADEFCGGAT ARNGGHCKPM TIFGYRAEAA KHGPKIANQL
LTFEAAALQQ YAAIVKKEDI DCDMHVTRAF DVCFRKEDAE AGKKDYEARK AAWGEDMAKH
DLRVVEDPKE LEALTGVRGG YWGASYPAGH LWPYKLASAL THIGLSRGLN FQTHTPALSL
ERSPSQPSQW VVTTPRGSIT TTSVVVATNA YTSGFLPEFK SLIFPVRGTA CSITPAPSHS
HGSIPGPIKY TFGFRHGPGE VDYMIPRQGR GRIPGSGDRS LILGGAKGCF LSNIDQWYDN
KNDNEHMPGA QKYFEGFMKK YFVGWNGNKH GNVDRVWSGI LGYSSDLLPY VGEVPNKPGV
FICAGFTGHG MPRIPGCTAA LSSLAFSYLS NGTTTPDANK AFQDALPQPY WLTKERFESK
INLIKAAMGQ RDKAKLDTTN QADEAILAAK MGDAKL