Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI00860 |
Symbol | |
ID | 3259593 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 215244 |
End bp | 217124 |
Gene Length | 1881 bp |
Protein Length | 516 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258571 |
Product | conserved hypothetical protein |
Protein accession | XP_572737 |
Protein GI | 58271162 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTAT CTCCCACCTA TCCCAACCAA GAAGATCGTC TACTCCCTGT CCAGAACCGT ACAGAGTCGT TCTGGCTTTC TGAACGCGAC CCACTTCTGC AGAATGCCCA CACTACACCT GAGCTCCCAA GGTCTGCCGA CGTTGTCATC GTTGGAAGTG GCCTCACTGG AGCCATGATG AGCTATCATG TGTACGAAAA TGCCCGAAAA GCTGGGAGGG ACATCAAGAT CGTTATGCTT GAGGCAGACG AATTTTGTGG TGGGGCTACA GCGAGGAACG GTGAGTCGTG ATTAGTCTTT TTATGACAGC AGATTATAGC TGATAGCTTG TTACTTGTAG GCGGTCACTG TAAGCCTATG ACTATTTTCG GCTACCGCGC AGAGGCAGCA AAACATGGAC CGAAAATCGC AAACCAGCTT CTCACATTTG AAGCCGCTGC TCTTCAACAG TACGCTGCGA TCGTCAAGAA GGAAGATATT GATTGTGACA TGCACGTCAC CAGAGCTTTT GACGTTTGCT TCAGGAAGGA AGACGCTGAG GCAGGCAAGA AGGATTACGA GGCGAGAAAG GCTGCTTGGG GTGAGGATAT GGCCAAACAC GACTTGAGAG TGGTAGAAGA TCCTAAAGAA CTTGAGGCGC TTACAGGTGT GCGAGGAGGG TATTGGGGCG CGAGCTACCC TGCCGGTCAC CTCTGGCCTT ACAAACTTGC TTCTGCTTGT AAGCCATATC CTCCTTGCCT GTGCGTAAAA ATGGAGCCTG ACAAAAGATA CAGTAACACA CATTGGCCTA AGCCGTGGTC TCAACTTTCA AACCCATACG CCCGCTCTAT CTCTTGAACG ATCCCCCTCC CAACCCAGTC AATGGGTGGT CACCACCCCC CGCGGATCTA TCACGACCAC TTCTGTCGTG GTAGCCACCA ACGCCTATAC TTCTGGCTTC CTTCCCGAAT TCAAATCTCT CATCTTCCCT GTCCGTGGTA CCGCATGCTC CATTACCCCC GCTCCTTCCC ACTCCCACGG GTCTATTCCG GGACCTATCA AATACACCTT TGGCTTCCGA CATGGCCCTG GGGAGGTAGA CTATATGATC CCCCGACAGG GTAGGGGTAG GATTCCTGGT AGCGGAGATA GGAGTCTCAT TCTTGGCGGA GCCAAGGGTT GCTTCTTGAG CAATATAGAT CAGTGGTATG ATAATAAGAA CGATAATGAG CACATGCCTG GAGCTCAAAA GTACTTTGAA GGCTTTATGA AAAAGTACTT TGTGGGTTGG AATGGTAATA AGCACGGTAA CGTTGATAGA GTCTGGTCTG GAAGTGAGTA CATCAATTGT AAACCACCAT GGTCCTCAGC TGACGAAGTG TCCCTTAGTC TTGGGCTACT CAAGCGATCT TCTTCCCTAT GTCGGTGAAG TCCCTAACAA GCCAGGAGTC TTTATTTGTG CCGGGTTCAC AGGACATGGT GAGCCTTGAT CATAGCAACT CGTAGCGAAT TTACAGCTGC TGATGAGCCT CTGTTTCTTA GGTATGCCTC GTATACCTGG TTGCACCGCC GCTCTCTCCT CTCTGGCTTT CTCTTACCTT TCGAACGGCA CCACGACACC TGACGCTAAC AAGGCCTTCC AAGATGCTCT TCCCCAACCA TATTGGTTGA CCAAGGAAAG ATTTGAGTCC AAGATAAACT TGATTAAGGC AGCTATGGGT CAAAGGGATA AGGCAAAATT GGATACCACC AATCAGGCCG ACGAAGCGAT TCTGGCGGCG AAGATGGGGG ACGCAAAGTT GTAAAGAATT TAGTACTAGA GATAATACAG TTATATGCGT AGACTCTTCT CAGGCACTTT CGTTTAGTTG TAAGATTGTA GGTTCTTTCC AGTTATCATG T
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Protein sequence | MTVSPTYPNQ EDRLLPVQNR TESFWLSERD PLLQNAHTTP ELPRSADVVI VGSGLTGAMM SYHVYENARK AGRDIKIVML EADEFCGGAT ARNGGHCKPM TIFGYRAEAA KHGPKIANQL LTFEAAALQQ YAAIVKKEDI DCDMHVTRAF DVCFRKEDAE AGKKDYEARK AAWGEDMAKH DLRVVEDPKE LEALTGVRGG YWGASYPAGH LWPYKLASAL THIGLSRGLN FQTHTPALSL ERSPSQPSQW VVTTPRGSIT TTSVVVATNA YTSGFLPEFK SLIFPVRGTA CSITPAPSHS HGSIPGPIKY TFGFRHGPGE VDYMIPRQGR GRIPGSGDRS LILGGAKGCF LSNIDQWYDN KNDNEHMPGA QKYFEGFMKK YFVGWNGNKH GNVDRVWSGI LGYSSDLLPY VGEVPNKPGV FICAGFTGHG MPRIPGCTAA LSSLAFSYLS NGTTTPDANK AFQDALPQPY WLTKERFESK INLIKAAMGQ RDKAKLDTTN QADEAILAAK MGDAKL
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